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Name : NOCYR_2580 (NOCYR_2580) Accession : YP_005263986.1 Strain : Nocardia cyriacigeorgica GUH-2 Genome accession: NC_016887 Putative virulence/resistance : Virulence Product : ABC transporter Function : - COG functional category : - COG ID : - EC number : - Position : 2856125 - 2857870 bp Length : 1746 bp Strand : + Note : Evidence 2b : Function of strongly homologous gene; Product type t : transporter DNA sequence : ATGAGCAGAATCCTGCGACTCATGCTGCTCGCCGCCGGGGACTATCGCGACGAGTTCCGCCGCACCCTGTGGTTCGCGCT GCTCGCCTCGATCCTGCAGGCGGCCGCCTATGCCACGCTGATCCCGATTCTGTACCAGCTGAGCCGTCCCGAGGTCGACA CCGCTGCGGCGTGGCGCTGGTTCGCGGTGCTGGTGGCGTGCTGGCTGCTCCAGGCGGCTTGCCACTACGGACAACTCAGG TTCGAGTTCGGCCGCTGGGCCGACGTGCTCGCTGCTACCCGGTTGCGACTGGGTGAGCGGCTGCGGACCATGCCGCAAGC CGACCTCGAGCGCCGGGCGGCGGGCGATCTCACCACGGTGATGGGCAGCAATGTCGCCAACGCGACGATGGGGTCGTCCG GGATGGCGCTGCTGTTCATCCAGATGGTGACCGTCCCGGTGATCATCGGCGCGATCGTCGTCGCGGTCGACTGGCGTCTG GGCTTGGTGCTGGCGGTGTCGCTGCCGTTCGCGGTGTTGTTCGTCCGCCGCATCCAGCAGATCACCGGTGCGGGTGCGCG CCGGACCGATGCGGCCGACGCCGCGGCCGCGAGCCGGGTGGTCGAGTACGTCCAGGGGCTGCCGGTGCTGCGCGCCACCG GCCAGGTGGGCAGCTCGTCGCAACGGCTGGTCGAGACCCTGGAGGAGCAGAACGCGGCCATGTCGGCGATGCAGAAGCGG CTGACCTGGCCCGGCCTGCTGGCGGCCGGCGTGGTCCAGCTGTGCCTGGTCGCGATGGTCGCTGCCGGCGCGGCCCTGGT GCTCGATCTGCGGCTGTCGGCGGCGCTGCTGATTGCCGTGGTGGCCGCCGCGGTGCGTTTCGCCGAACCGCTGTCGACGA TGGCCAACATGTCGGCGATCTTCGAGGTCGTCGACTCGGCGCTGGAGCGCGTCGGCGAGGTGCTCGATACCGCGCCGTTG CCGGTGCGCGCGCCGGAGGCCCGGATCACCGGGCACGACGTGGAATTCGAGGACGTGCGTTTCGGGTACGGCGACGGTGC GCAGGTGCTGCGCGGGGTGTCGTTCACCGCGCCCGCGCGCTCGCTCACCGCACTGGTCGGACCCTCGGGCTCCGGGAAGT CGACGGTGACCCGGTTGCTGACCCGGTACGCCGACCCCGATGCCGGCGCGGTCCGGATCGGCGGGACCGACCTGCGCGAC CTCGACCCGGTGCAGATCTACCGCGACGTCGCGGTCGTGTTCCAGGACGTCTACCTGTTCGACGACACCATCCGGGCGAA CATCGCGATGGCGGCTCCGGAGGCCACCCAGGAACAGATCGAGGCCGCGGCCAGGGCCGCCAACGTGCACACCTTCGTCG AACGGCTGCCGCACGGCTACGACACCCGGGTCGGTGAGATCGGCGGCGCGCTGTCCGGCGGTGAGCGCCAGCGCATCTCG ATCGCCCGCGCGATCCTCAAGGACGCGCCCATCGTCGTGCTGGATGAGCCGACCTCGGCACTGGACACCGAGAGCGAGGT CTTTGTGCAGGAGGCCATCGACGCCCTGGTCGCAGACAAGACCGTTGTCGTGATCGCCCACCGGCTCTCCACTGTCGTTG CCGCAGACCAGATCTTGGTGCTGGCGGACGGTGTGATCGCCGAGCGCGGCACCCACGCCGAACTACTGGCCAGGGAGGGT CGCTACAGCGCCATGTGGGCCGCGCAGACCAAGGCGCGGCACTGGAAGGTCGGTGCCGCGGTGTAG Protein sequence : MSRILRLMLLAAGDYRDEFRRTLWFALLASILQAAAYATLIPILYQLSRPEVDTAAAWRWFAVLVACWLLQAACHYGQLR FEFGRWADVLAATRLRLGERLRTMPQADLERRAAGDLTTVMGSNVANATMGSSGMALLFIQMVTVPVIIGAIVVAVDWRL GLVLAVSLPFAVLFVRRIQQITGAGARRTDAADAAAASRVVEYVQGLPVLRATGQVGSSSQRLVETLEEQNAAMSAMQKR LTWPGLLAAGVVQLCLVAMVAAGAALVLDLRLSAALLIAVVAAAVRFAEPLSTMANMSAIFEVVDSALERVGEVLDTAPL PVRAPEARITGHDVEFEDVRFGYGDGAQVLRGVSFTAPARSLTALVGPSGSGKSTVTRLLTRYADPDAGAVRIGGTDLRD LDPVQIYRDVAVVFQDVYLFDDTIRANIAMAAPEATQEQIEAAARAANVHTFVERLPHGYDTRVGEIGGALSGGERQRIS IARAILKDAPIVVLDEPTSALDTESEVFVQEAIDALVADKTVVVIAHRLSTVVAADQILVLADGVIAERGTHAELLAREG RYSAMWAAQTKARHWKVGAAV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| irp7 | YP_001006812.1 | inner membrane ABC-transporter YbtQ | Not tested | HPI | Protein | 7e-82 | 42 |
| irp7 | YP_002346905.1 | ABC transporter permease | Not tested | HPI | Protein | 1e-82 | 42 |
| ybtQ | NP_669703.1 | permease and ATP-binding protein of yersiniabactin-iron ABC transporter | Virulence | HPI | Protein | 1e-82 | 42 |
| ybtQ | NP_993010.1 | ABC transporter permease | Virulence | HPI | Protein | 1e-82 | 42 |
| ybtQ | YP_070127.1 | ABC transporter permease | Virulence | HPI | Protein | 1e-82 | 42 |
| ybtQ | CAA21387.1 | - | Virulence | HPI | Protein | 1e-82 | 42 |
| irp7 | CAB46572.1 | inner membrane ABC-transporter, Irp7 | Virulence | HPI | Protein | 5e-82 | 42 |
| APECO1_1055 | YP_853072.1 | ABC transporter | Not tested | PAI IV APEC-O1 | Protein | 7e-83 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| NOCYR_2580 | YP_005263986.1 | ABC transporter | BAC0433 | Protein | 7e-83 | 42 |
