Name : NOCYR_2579 (NOCYR_2579) Accession : YP_005263985.1 Strain : Nocardia cyriacigeorgica GUH-2 Genome accession: NC_016887 Putative virulence/resistance : Virulence Product : ABC transporter ATP-binding protein Function : - COG functional category : - COG ID : - EC number : - Position : 2854305 - 2856128 bp Length : 1824 bp Strand : + Note : Evidence 2b : Function of strongly homologous gene; Product type t : transporter DNA sequence : GTGGACGAGGCGGGGCAGGAGCCGCAGCAGGCCGACCACGCGGACGCGGTGCCACCGGGCAGCGCGCTCTTCCGGGTGAC CGAGCCGGTCCGCGGGCGGCTCATGGCCGCGCTCGCCGTCGCCGCGCTCGGCGGCGCGGCGGGGGTCGCCGGCTTCGTCG GCCTGGCGCTGGCACTGCGGGAACTGCTGGCCGCGGACACCGCGAGCGACGCGGTCGTGGCCTATCTCGTGATCGCCGCT GCGGGGTTCCTCGCCCGATTCGCGTTGCGCGCCTGGTCTTTCCTGCTCTCGCACCTGGCATCGTTCGATCTCGAGCAGCG CCTGCGCCGCGATCTTGCCGCGCATCTGGCCCGGGTCCCGCTGGGGGAGGCGCAGCGGCTGGGCTCGGGCGCGGTGAAGA AGATCGTCCAGGACGATGTGCGCGGGCTGCACATGGCAGTGGCCGACGCCGTGCCGCTCGCCGGTTTCACGCTGGCGCAG CCCATCGCGGCATTGATCGCCCTGGGATTCGTGGACTGGCGGCTGCTGCTGGCGGTCGTGCTGGTGCTGCCGGTGGTGTT CATCGGGATGCAGCTGAGCCTGCGCGATTACGTCGAGACCCGGCGCCGCTACGACGAGGCCAACGAAGCGATCAACGCCG CGACGGTCGAGTTAGTGCAGGGCATGCCGGTGGTGCGGACCTTCGACGACGGCACCGCCTCCTTCCGCCGGTTCGTCGAC CGGGTCCGGCAGTTCAACGTCGCTACGACCAACTGGCAGAACAACAATCGCGCCGCGATGATCTTCGCCAACCTGACCGT CGCGCCGCTGCCCACCATCGTCATCGTGACCGCGGTCGGCATCTGGCTGACCTCCGCCGGATCGATGTCGCCCGCCTCGC TCATCGCCGCCATCCTCATCGGCACCCTGCCGGTGGAGTCGGTGGTGCCGCTGATGAACCTGTCGAACCTGATCAACGAC TCCAAGGCCGGTGCGGCGCGGATCGCCGAACTGCTCGATATCGCGCCGCTGCCTGAGCCGCAGCATCCGCAGGCCCCGGC CGACGGGTCGATCGAATTCCGCTCCGTCCGCTTCGGCTACACGGGCGCGGACCGGGCCGCCCTCGACGGTGTCGATCTGA CGGTGCCGAGCGGGACGGTGTGCGCCCTGGTCGGGCCGTCCGGGTCCGGGAAATCGACGGTCGCACGGCTGATTCCGCGG TTCTGGGACGTCGATTCCGGTCAGGTCCTCGTCGGCGGCGTCGATGTGCGCCAGATCGGGTCCGAGGATCTGCTGCGGCA CCTGGCGATGGTCTTCCAGGACCCGTTCCTGCTGTCCGACACCGTGGCCGCCAACATCCGGCTCGGCCGGCCTTCGGCCA CCGACGCCGAGGTCGAGGCCGCTGCGCGGGCCGCGCGGGCACACGATTTCATCGTCTCGGAACTGCCGCACGGCTACGAC ACCCCGGTGGGCGAGCGCGGGGCACGGCTCTCCGGCGGCCAGCGGCAGCGGATCACCATCGCGCGGGCCCTGCTGACGGA CGCGCCGATCGTCATCCTCGACGAAGCGACCTCGTTCGCCGACCCGGAGAACGAGGCCGCCATCCAGGACGCCATCGCCG AACTCACCCGCGGCCGCACCGTGCTCGTGGTCGCGCACCGGCTGTCGACGATCGTCGACGCCGATCAGATCGTGGTGCTC GAATCCGGTCGCGTGGCCGAAACCGGCACGCACACCGAACTCGTCGCGTCCGGCGGCACCTATGCCCGGCTCTGGGAGCA CCACCAGCGCGCCAGGGGCTGGGGCCTCGGCGCGGGCACCATCGAGGAGGTCATGAACCGATGA Protein sequence : MDEAGQEPQQADHADAVPPGSALFRVTEPVRGRLMAALAVAALGGAAGVAGFVGLALALRELLAADTASDAVVAYLVIAA AGFLARFALRAWSFLLSHLASFDLEQRLRRDLAAHLARVPLGEAQRLGSGAVKKIVQDDVRGLHMAVADAVPLAGFTLAQ PIAALIALGFVDWRLLLAVVLVLPVVFIGMQLSLRDYVETRRRYDEANEAINAATVELVQGMPVVRTFDDGTASFRRFVD RVRQFNVATTNWQNNNRAAMIFANLTVAPLPTIVIVTAVGIWLTSAGSMSPASLIAAILIGTLPVESVVPLMNLSNLIND SKAGAARIAELLDIAPLPEPQHPQAPADGSIEFRSVRFGYTGADRAALDGVDLTVPSGTVCALVGPSGSGKSTVARLIPR FWDVDSGQVLVGGVDVRQIGSEDLLRHLAMVFQDPFLLSDTVAANIRLGRPSATDAEVEAAARAARAHDFIVSELPHGYD TPVGERGARLSGGQRQRITIARALLTDAPIVILDEATSFADPENEAAIQDAIAELTRGRTVLVVAHRLSTIVDADQIVVL ESGRVAETGTHTELVASGGTYARLWEHHQRARGWGLGAGTIEEVMNR |
Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
irp6 | YP_002346904.1 | lipoprotein inner membrane ABC transporter | Not tested | HPI | Protein | 9e-91 | 47 |
ybtP | CAA21388.1 | - | Virulence | HPI | Protein | 9e-91 | 47 |
ybtP | YP_070126.1 | lipoprotein inner membrane ABC-transporter | Virulence | HPI | Protein | 5e-91 | 47 |
ybtP | NP_993009.1 | permease and ATP-binding protein of yersiniabactin-iron ABC transporter | Virulence | HPI | Protein | 1e-90 | 46 |
irp6 | CAB46573.1 | lipoprotein inner membrane ABC-transporter, Irp6 | Virulence | HPI | Protein | 2e-90 | 46 |
irp6 | YP_001006813.1 | lipoprotein inner membrane ABC-transporter | Not tested | HPI | Protein | 3e-90 | 46 |
ybtP | YP_853073.1 | inner membrane ABC-transporter | Not tested | PAI IV APEC-O1 | Protein | 2e-90 | 46 |
ybtP | NP_669704.1 | permease and ATP-binding protein of yersiniabactin-iron ABC transporter | Virulence | HPI | Protein | 1e-90 | 46 |
Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
NOCYR_2579 | YP_005263985.1 | ABC transporter ATP-binding protein | BAC0432 | Protein | 4e-91 | 47 |