Gene Information

Name : rph (NOCYR_1180)
Accession : YP_005262622.1
Strain : Nocardia cyriacigeorgica GUH-2
Genome accession: NC_016887
Putative virulence/resistance : Unknown
Product : ribonuclease PH (RNase PH) (tRNA nucleotidyltransferase)
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1309373 - 1310056 bp
Length : 684 bp
Strand : +
Note : Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 1925027, 1512252; Product type e : enzyme

DNA sequence :
GTGCTGGTGGAGTTCGGTCAGACGCGGGTGATGTGCACCGCGAGCGTCACCGAGGGCGTGCCGGCGTGGCGGCGCGATAC
CGGACTGGGCTGGCTCACCGCCGAATACGCCATGCTGCCCGCTGCCACCCACACCCGCAGCGGCCGGGAGTCGGTGAAGG
GCAAGATCGGCGGCCGCACCCAGGAGATCAGCCGCCTGATCGGGCGTTCGCTGCGCGCCTGCATCGACCTGGCCGCCATC
GGCGAGAACACCATCGCCATCGACTGTGATGTGCTGCAAGCCGACGGCGGTACCCGCACCGCCGCGATCACCGGTGCGTA
TGTCGCGCTCTCCGACGCCGTCACCTATCTGGCGGCCGCGGGCAAGCTGGCCGACCCGCAGCCGATCTCCTGCGCTATCG
CCGCGGTGAGCGTCGGCGTGGTCGACGGCCGGGTGCGTCTGGATCTGCCGTATGAGGAGGATTCGCGCGCCGAGGTGGAC
ATGAACGTGGTCGCCACCGACACCGGCACGCTCGTCGAGGTGCAGGGCACCGGTGAGGGCGCCACCTTCCCGCGCTCCAC
CCTGGACAAGCTGCTCGATTCCGCGCTCGCCGGTTGCGAGCAGCTGTTCGCCATCCAGAAGGAAGCGCTCGCGCTGCCGT
ACCCGGGTGTGCTGCCCGAGCCGGCCGAACCGAAGAAGAAGTGA

Protein sequence :
MLVEFGQTRVMCTASVTEGVPAWRRDTGLGWLTAEYAMLPAATHTRSGRESVKGKIGGRTQEISRLIGRSLRACIDLAAI
GENTIAIDCDVLQADGGTRTAAITGAYVALSDAVTYLAAAGKLADPQPISCAIAAVSVGVVDGRVRLDLPYEEDSRAEVD
MNVVATDTGTLVEVQGTGEGATFPRSTLDKLLDSALAGCEQLFAIQKEALALPYPGVLPEPAEPKKK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
rph YP_001800860.1 ribonuclease PH Not tested Not named Protein 2e-61 66