Gene Information

Name : Sulac_3375 (Sulac_3375)
Accession : YP_005258490.1
Strain : Sulfobacillus acidophilus DSM 10332
Genome accession: NC_016884
Putative virulence/resistance : Virulence
Product : polysaccharide biosynthesis protein CapD
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3333022 - 3334911 bp
Length : 1890 bp
Strand : -
Note : PFAM: Polysaccharide biosynthesis protein; COGs: COG1086 nucleoside-diphosphate sugar epimerase; InterPro IPR003869; KEGG: dsy:DSY3347 hypothetical protein; PFAM: Polysaccharide biosynthesis protein CapD-like; SPTR: Putative uncharacterized protein

DNA sequence :
GTGGCTCAAAAATTAATCTATTATATGAAAATATGGGTGGCCATGATGGCGGATGCCGTTTTGGTCAATGTTGCCGTATA
TTTGGCATTATATCTTCGATTTGATACTCCCCGCATACCGGTTTTCTATTTGGATCCGTATTTGCGCGTCGCACCCTATT
TTACCGTGGCCACCGTTTTGTTGCTGTGGGTTACGCGGATTTACCACCGGCTTTGGCGTTATGCCAGCTGGCGCGACGCC
CAAGTGCTGATTTTGTCGTTGTTCGGTAGCAGCGTCATGTTAGGACTGGCGCTCTTTATTTCCCGCACCGCCCATTACTC
ACGGGCCGTTTATTTGCTCTATGCGTTGTTTGCGGTGGCGTTGTTGGGCGGGTGGCGGTTTTTGCTCCGATCGTTTTACG
ACATCAGTTGGTCCCCCCGGTCGCGAGCACGCGAGAGAGTACTCATCGTGGGAGCCGGAAAGGCCGGCCAATTAGTCGCC
GAAGAGCTTTTGCGGCATCCCGAGGTCGGGCTCGCGGTGGGATTCTTGGACGACGATATGCAGAAAGTCGGTTTTCAGAT
TGGTCCCCTCAAAGTCTTGGGTACCACGCACGATATTCGGACGATTGTCCGCGATCACCAAATTGACCAAGTATTATTGG
CGATGCCGTCGGCTTCCGGTCGCGTGATTCGCCCATTGGTGGAAGAATGTCGCGATTTGGGGATCAAAGTACGGATTTTA
CCGGCGATTAATCAAATGATTGGGGGCCAAGTGTCGGTTCGACAAATCCGTGACGTGCAGATTGAGGATTTGTTACAGCG
GGAACCGGCGGTCATCGATTTGGGGGAAATCGCCGGCTATATTACCGGCCGCGTGGTGATGGTCACCGGCGCCGGCGGTA
CCATCGGATCCGAATTGGCACGGCAAGTTGCGCCTTTTGCACCCCGGCAACTGGTGTTGTTGGGGTTGGACGAAACGTCG
ATTTTTGAAATCGATCGGGATATGCGACTCCGGTTTCCGGATGTGCCGGTGGTGCCGATTGTGGCGGATCTACGGGATCG
CGGTCGATTAGAGCGTATTTTCGGAGCCTACCGCCCCCAAGTCATTTTTCATGCGGCGGCCCATAAGCATGTTCCGTTAA
TGGAACAACAACCCGACGAAGCGATTGACAATAATGTGGCCGCTTTATGGCAATTGGCCGACATGAGCCATCGACAAGGG
GTCGAAACTTTTGTCTTTATCTCGACCGACAAGGCCGTCAACCCGACGAGCGTCTACGGAGCGACCAAACGCATCGGCGA
ACTTTTGGTGCGGGTTTATGCCAGCCGTTCTTCGACTCGTTTCGTGACCGTGCGATTTGGCAACGTACTGGGGTCGCGCG
GCAGCGTGATTCCCATTTTTCAACAGCAGATTGCTCAGGGCGGGCCGGTGACGGTGACCCATCCGGACATGGTGCGATAT
TTTATGACGGTTTCCGAGGCGTGTCAGTTGGTGATTCAGGCCGGGGCCATGGGCAGTAGCGGGGAGATTTATGTGTTGGA
TATGGGGGAACCGATTCGCATCTTAGACTTGGCCACCAACTTGATTCGCCTCTCCGGGCTTCGGCCGGGGGTCGATATCG
ACATTGTTTTTACCGGCATTCGACCCGGCGAAAAGCTTTATGAAGAATTGCTCACCGCGGAAGACGAGACCCGGACCACC
CGTCATGAACGCATTTTTGTTCATAACGAGCCCCCCGTCAACGCGTCGGATATGTTGGGCAAGATTGAAACCTTGATTCG
ACGGGCAGCTGACGTCTCACGGCCGGAATTGATGGCGCTCATTCAAGCGATTGTGCCGGAGTATCAACCGGCCCTGAAAT
CGCGTGTCATTACAGCGGAGGAGGGAACCACCCGTGCCATCCGATCCTGA

Protein sequence :
MAQKLIYYMKIWVAMMADAVLVNVAVYLALYLRFDTPRIPVFYLDPYLRVAPYFTVATVLLLWVTRIYHRLWRYASWRDA
QVLILSLFGSSVMLGLALFISRTAHYSRAVYLLYALFAVALLGGWRFLLRSFYDISWSPRSRARERVLIVGAGKAGQLVA
EELLRHPEVGLAVGFLDDDMQKVGFQIGPLKVLGTTHDIRTIVRDHQIDQVLLAMPSASGRVIRPLVEECRDLGIKVRIL
PAINQMIGGQVSVRQIRDVQIEDLLQREPAVIDLGEIAGYITGRVVMVTGAGGTIGSELARQVAPFAPRQLVLLGLDETS
IFEIDRDMRLRFPDVPVVPIVADLRDRGRLERIFGAYRPQVIFHAAAHKHVPLMEQQPDEAIDNNVAALWQLADMSHRQG
VETFVFISTDKAVNPTSVYGATKRIGELLVRVYASRSSTRFVTVRFGNVLGSRGSVIPIFQQQIAQGGPVTVTHPDMVRY
FMTVSEACQLVIQAGAMGSSGEIYVLDMGEPIRILDLATNLIRLSGLRPGVDIDIVFTGIRPGEKLYEELLTAEDETRTT
RHERIFVHNEPPVNASDMLGKIETLIRRAADVSRPELMALIQAIVPEYQPALKSRVITAEEGTTRAIRS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cap1D AAA64643.1 type 1 capsule synthesis gene Virulence SCCcap1 Protein 3e-86 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Sulac_3375 YP_005258490.1 polysaccharide biosynthesis protein CapD VFG1300 Protein 1e-90 44
Sulac_3375 YP_005258490.1 polysaccharide biosynthesis protein CapD VFG0029 Protein 4e-81 44