Gene Information

Name : Sulac_3139 (Sulac_3139)
Accession : YP_005258257.1
Strain : Sulfobacillus acidophilus DSM 10332
Genome accession: NC_016884
Putative virulence/resistance : Virulence
Product : flagellar biosynthetic protein FliP
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3089335 - 3090087 bp
Length : 753 bp
Strand : -
Note : PFAM: FliP family; TIGRFAM: flagellar biosynthetic protein FliP; COGs: COG1338 Flagellar biosynthesis pathway component FliP; InterPro IPR005837:IPR005838; KEGG: slp:Slip_0969 flagellar biosynthetic protein FliP; PFAM: Type III secretion system inner memb

DNA sequence :
ATGAGCCGACGCGGACTCTGGGGGCTTTTGGGGGTCGCGCTCGTCGGGATCCCCTGGTGGGCAGGGGGTGTGGCTTACGC
GCAATCCGGATTGCCGACCATCAGCATTAATCCGGGGCAAACCGCCAGTCCGAGTCAAACGCTGAGTATTTTGGCGTTAC
TGACCTTAATGGCGTTTATCCCGGGGCTTTTGCTGACGATGACCGCCTTTACCCGGGTCATTACGGTTTTGTCTTTTACC
CGGAGTGCGCTCGGGTTGCAACAAACGCCGCCCAATCAGGTCTTGGTGGGCCTCGCCTTATTTCTGACCTTTTTCATCAT
GCAACCGACGTTAACGGCCATTAACCATCAAGCGCTCCATCCCTACCTGACGGGGCACTTGACCTTGGTGGAAGCGGGGC
GGCGGGCGTTGGGACCTCTCCGGCAGTTTATGTATCATGAAACGCGCCCGAGTGATCTGGCTCTTTTTTTGCAGCTGGAT
CACGTCCATGCTCCCAGGACTTTGGCGGGGGTGCCGACCGCCGCGTTAATCCCGGCTTTCATCATTTCGGAATTGAAAAC
CGCATTTGAGATTGGGGTTTATATCTTTATTCCGTTCGTCATGATTGATCTGGTCGTCTCGACCGTCTTAATGTCGATGG
GCATGATGATGGTTCCGCCTACCCTGATTTCTCTGCCTCTAAAGCTACTGCTGTTTGTGTTGGCCAACGGGTGGAGTTTA
GTGGTTCAATCGCTGGTTATGTCGTTTCACTGA

Protein sequence :
MSRRGLWGLLGVALVGIPWWAGGVAYAQSGLPTISINPGQTASPSQTLSILALLTLMAFIPGLLLTMTAFTRVITVLSFT
RSALGLQQTPPNQVLVGLALFLTFFIMQPTLTAINHQALHPYLTGHLTLVEAGRRALGPLRQFMYHETRPSDLALFLQLD
HVHAPRTLAGVPTAALIPAFIISELKTAFEIGVYIFIPFVMIDLVVSTVLMSMGMMMVPPTLISLPLKLLLFVLANGWSL
VVQSLVMSFH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hrcR AAT96146.1 HrcR Virulence T-PAI Protein 3e-20 44
hrcR AAT96200.1 HrcR Virulence T-PAI Protein 3e-20 44
hrcR NP_791222.3 type III secretion protein HrcR Virulence Hrp PAI Protein 1e-20 42
hrcR AAG33884.1 HrcR Virulence Hrp PAI Protein 1e-20 42
hrcR ABQ88359.1 HrcR Virulence Hrp PAI Protein 2e-19 42
hrpW AAB05075.1 HrpW Virulence Hrp PAI Protein 2e-19 42
YPO0270 YP_002345352.1 type III secretion system protein Virulence Not named Protein 5e-21 41
hrcR AAB06005.2 HrcR Virulence Hrp PAI Protein 6e-21 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Sulac_3139 YP_005258257.1 flagellar biosynthetic protein FliP VFG2016 Protein 3e-46 51
Sulac_3139 YP_005258257.1 flagellar biosynthetic protein FliP VFG1259 Protein 4e-43 50
Sulac_3139 YP_005258257.1 flagellar biosynthetic protein FliP VFG2494 Protein 2e-43 50
Sulac_3139 YP_005258257.1 flagellar biosynthetic protein FliP VFG2338 Protein 4e-38 48