Gene Information

Name : STMUK_4244 (STMUK_4244)
Accession : YP_005254692.1
Strain : Salmonella enterica UK-1
Genome accession: NC_016863
Putative virulence/resistance : Virulence
Product : putative ABC exporter outer membrane component
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4441012 - 4442331 bp
Length : 1320 bp
Strand : +
Note : similar to ABC exporter outer membrane component (gi|7467234)

DNA sequence :
ATGAAGATTAAGATGTTTTTTCTGACGACTGCTTTTATTACACAAAGCACATACGCCAGCGAGCTTCCGGTCATTCCTCT
AAGAGATTTAGTTAATGCCGCATTAACGCATCAGCCCTCTGTTGCTGTTTCATATTATGAGACTGAAAAGAAAAACAGTG
ACTTAGATCTTTCACGGGCAGCACTTTATCCTACCCTGGATCTAACATCTGGCCTTAATAATAACAGGAAAGAGTCATCA
GGTACCGAGAGGAACGTTGAAAATAAGGTGTCTTTATCATACCGAATAACGGATTTTGGAGTGAGGGGGGCTAATATCAG
GAAATCTGAATATGAAAGAGATAATAGTAAAACTGACTATGAAAAAACAAAGAATATAGTGTCTCAGGAGGTTGTGACAA
CCTATTACAACATCAGTAAATATCGTGAAATGATTGATGGCGTAAATCTGGAGAAAGAGTTTTATAAAAAGATGCTGGAA
ACTTTTTCGTTGCTGGTATCTTCCGGTGTAGCTATGCAATCTGATATGCGTAAAGTACAAGTATCTATCGATGCATTAAA
TACCAGAAGCATTATGTATCAGTCGATGTTGGATGATGAAATGTATAAAATGCAGAATATGACTGGTCTGAATTTATCGC
CAGTTCAGATTCAAAGCGATGAAAAATTCAACCTCTTCAAAAAATATATCTTTGTCGAAAGCCCTGAAAAACTTATGGAC
ATGGTGATGAAATACAACGATGACTATAAGATGCTTGTCAATACCCGAAAAGCCGCGACCGAAGATATTAATGCCGCAAA
ATCATCCTATTTTCCGACTGTAGATCTTGTTTCCAGCTATGTACAGAATAACCCGAGCGGTAGTGCCAAAAAAAGTGATT
ATGAAGATGAATTTAAAACGGGTATCAATGTCAGTTTCAACATTTTTAATGGGTTCAGAAATTCAGCCCAGGAAAGAAAA
ATGGTGGCAAGTTACTCGCAGGCTAAGCTGCAAATTGACGATTTTTTGATTAAAACGCGTTATAACATTGATTCACAACT
TTCAAGATACGCCGCTGCAAAAGAGACTTACTCAGTGGCGGAACGTTCACATACAAACGCGTTACAGCTTACTGAATTAT
ATGAGCAGGAGTTTCAGTTAGGGCAAAAAAGTTTGCTTGATTTAATTTCAAGCCGTAATGAAGCATTTCAGGCATATGTA
AGCATGATCGACAGCAAATATAGCCTGTATATTTTAAAGCTACAGCAACTCTCATTGATTTTTCATTTAATGGATTATTT
AAAAGGAAATACTGAAAGTGAGTTAAATGTAATGAAATGA

Protein sequence :
MKIKMFFLTTAFITQSTYASELPVIPLRDLVNAALTHQPSVAVSYYETEKKNSDLDLSRAALYPTLDLTSGLNNNRKESS
GTERNVENKVSLSYRITDFGVRGANIRKSEYERDNSKTDYEKTKNIVSQEVVTTYYNISKYREMIDGVNLEKEFYKKMLE
TFSLLVSSGVAMQSDMRKVQVSIDALNTRSIMYQSMLDDEMYKMQNMTGLNLSPVQIQSDEKFNLFKKYIFVESPEKLMD
MVMKYNDDYKMLVNTRKAATEDINAAKSSYFPTVDLVSSYVQNNPSGSAKKSDYEDEFKTGINVSFNIFNGFRNSAQERK
MVASYSQAKLQIDDFLIKTRYNIDSQLSRYAAAKETYSVAERSHTNALQLTELYEQEFQLGQKSLLDLISSRNEAFQAYV
SMIDSKYSLYILKLQQLSLIFHLMDYLKGNTESELNVMK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SC4138 YP_219125.1 ABC transporter outer membrane protein Not tested SPI-4 Protein 0.0 100
STM4259 NP_463124.1 ABC exporter outer membrane component Not tested SPI-4 Protein 0.0 100
siiC CAE11795.1 putative type-I secretion protein, putative outer membrane component Virulence SPI-4 Protein 0.0 100
STY4456 NP_458556.1 putative type-I secretion protein Not tested SPI-4 Protein 0.0 99
spi4_C AAC26641.1 ABC exporter outer membrane component homolog Virulence SPI-4 Protein 0.0 99

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
STMUK_4244 YP_005254692.1 putative ABC exporter outer membrane component VFG0579 Protein 0.0 100