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Name : xerD (STMUK_3032) Accession : YP_005253528.1 Strain : Salmonella enterica UK-1 Genome accession: NC_016863 Putative virulence/resistance : Unknown Product : site-specific tyrosine recombinase XerD Function : - COG functional category : - COG ID : - EC number : - Position : 3171169 - 3172065 bp Length : 897 bp Strand : - Note : site-specific tyrosine recombinase which cuts and rejoins DNA molecules; binds cooperatively to specific DNA consensus sites; forms a heterotetrameric complex with XerC; XerCD exhibit similar sequences; essential to convert chromosome dimers to monomers d DNA sequence : ATGGAACAGGATTTAGCGCGTATTGAGCAGTTTCTGGATGCCCTGTGGCTGGAACGAAATCTGGCGGAAAATACATTAAG CGCGTATCGTCGCGATTTATCGATGGTCGTTGCGTGGTTGCATCATCGCGGAAAAACGCTTGCGACGGCGCAGGCTGATG ATTTACAAACGCTATTGGCTGAACGTGTGGAGGGCGGATACAAAGCGACCAGCTCCGCACGCCTGTTAAGCGCTATGCGG CGCTTTTTCCAGCATCTGTACCGTGAAAAGTATCGTGAGGATGATCCGAGCGCGCAGTTGGCCTCGCCTAAGCTTCCGCA GCGTTTACCGAAAGATCTTAGCGAGGCGCAGGTTGAACGGCTCTTGCAGGCGCCGCTTATTGATCAACCTTTGGAGCTGC GCGATAAAGCTATGTTGGAAGTGCTGTATGCCACCGGTTTGCGCGTGTCGGAACTGGTGGGGCTGACAATGAGCGATATC AGTCTGCGGCAGGGCGTGGTGCGGGTTATCGGTAAAGGCAATAAAGAGCGGTTGGTGCCGTTAGGTGAAGAGGCGGTATA TTGGCTGGAAACGTATCTGGAGCATGGGCGTCCATGGTTACTCAATGGCGTATCGATTGACGTATTATTCCCCAGCCAGC GTGCGCAGCAGATGACGCGGCAGACCTTCTGGCACCGTATTAAACATTATGCGGTACTGGCTGGAATCGATAGCGAAAAA CTATCGCCGCATGTTTTACGTCACGCTTTCGCCACGCATTTGCTGAATCACGGCGCCGACTTGCGCGTTGTACAAATGCT ACTTGGGCATAGCGATCTTTCGACGACACAAATTTATACGCATGTCGCAACGGAGCGTTTGCGTCAACTTCATCAACAGC ACCATCCGCGGGCATGA Protein sequence : MEQDLARIEQFLDALWLERNLAENTLSAYRRDLSMVVAWLHHRGKTLATAQADDLQTLLAERVEGGYKATSSARLLSAMR RFFQHLYREKYREDDPSAQLASPKLPQRLPKDLSEAQVERLLQAPLIDQPLELRDKAMLEVLYATGLRVSELVGLTMSDI SLRQGVVRVIGKGNKERLVPLGEEAVYWLETYLEHGRPWLLNGVSIDVLFPSQRAQQMTRQTFWHRIKHYAVLAGIDSEK LSPHVLRHAFATHLLNHGADLRVVQMLLGHSDLSTTQIYTHVATERLRQLHQQHHPRA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB07104_00307 | YP_008207772.1 | Site-specific recombinase XerD | Not tested | AbaR25 | Protein | 6e-62 | 54 |
| BJAB0868_00311 | YP_008211637.1 | Site-specific recombinase XerD | Not tested | AbaR26 | Protein | 6e-62 | 54 |
