Gene Information

Name : marA (STMUK_1484)
Accession : YP_005252020.1
Strain : Salmonella enterica UK-1
Genome accession: NC_016863
Putative virulence/resistance : Resistance
Product : DNA-binding transcriptional activator MarA
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1555262 - 1555696 bp
Length : 435 bp
Strand : -
Note : transcriptional activator of genes involved in the multiple antibiotic resistance (Mar) phenotype; also activates sodA, zwf and micF

DNA sequence : 
TTGAGTATTTGCTCAAGAAAATTCTGCCGTAGACAAAAAAGAGGTATGACGATGTCCAGACGCAACACTGACGCTATTAC
TATTCATAGCATTTTGGACTGGATCGAGGATAACCTGGAGTCGCCGCTCTCACTGGAAAAAGTGTCTGAGCGTTCAGGAT
ATTCCAAATGGCACCTGCAACGGATGTTTAAAAAAGAGACCGGTCATTCATTAGGCCAATACATCCGCAGCCGTAAAATG
ACGGAAATCGCGCAAAAATTAAAAGAGAGCAACGAGCCCATTCTCTATCTGGCGGAACGCTATGGCTTTGAGTCACAGCA
AACATTGACCCGGACGTTCAAAAACTATTTTGATGTGCCGCCACACAAATACCGGATCACCAATATGCATGGCGAATCAC
GGTATATGCTGCCGCTGAACCATGGCAACTACTAG

Protein sequence : 
MSICSRKFCRRQKRGMTMSRRNTDAITIHSILDWIEDNLESPLSLEKVSERSGYSKWHLQRMFKKETGHSLGQYIRSRKM
TEIAQKLKESNEPILYLAERYGFESQQTLTRTFKNYFDVPPHKYRITNMHGESRYMLPLNHGNY

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tetD AAL08447.1 putative transcriptional regulator TetD Not tested SRL Protein 6e-21 43
tetD AEA34665.1 tetracycline resistance protein D Not tested Not named Protein 6e-21 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
marA YP_005252020.1 DNA-binding transcriptional activator MarA CP001138.1.gene1637. Protein 5e-57 100
marA YP_005252020.1 DNA-binding transcriptional activator MarA CP000034.1.gene1596. Protein 3e-54 96
marA YP_005252020.1 DNA-binding transcriptional activator MarA BAC0560 Protein 2e-53 96
marA YP_005252020.1 DNA-binding transcriptional activator MarA NC_002695.1.917339.p Protein 2e-53 96
marA YP_005252020.1 DNA-binding transcriptional activator MarA CP001918.1.gene2033. Protein 4e-52 95
marA YP_005252020.1 DNA-binding transcriptional activator MarA CP000647.1.gene1624. Protein 7e-52 93
marA YP_005252020.1 DNA-binding transcriptional activator MarA NC_010558.1.6276025. Protein 3e-21 43
marA YP_005252020.1 DNA-binding transcriptional activator MarA CP001138.1.gene612.p Protein 1e-22 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
marA YP_005252020.1 DNA-binding transcriptional activator MarA VFG1038 Protein 2e-21 43