|
Name : ssaT (STMUK_1387) Accession : YP_005251925.1 Strain : Salmonella enterica UK-1 Genome accession: NC_016863 Putative virulence/resistance : Virulence Product : type III secretion system apparatus protein Function : - COG functional category : - COG ID : - EC number : - Position : 1457822 - 1458601 bp Length : 780 bp Strand : + Note : secretion system apparatus protein SsaT (SW:SSAT_SALTY); similar to YscT of the secretion system of Yersinia DNA sequence : ATGGCACAACAGGTAAATGAGTGGCTTATTGCATTGGCTGTGGCTTTTATTCGACCATTGAGCCTTTCTTTATTACTTCC CTTATTAAAAAGTGGCAGTTTAGGGGCCGCACTTTTACGTAATGGCGTGCTTATGTCACTTACCTTTCCGATATTACCAA TCATTTACCAGCAGAAGATTATGATGCATATTGGTAAAGATTACAGTTGGTTAGGGTTAGTCACTGGAGAGGTGATTATT GGTTTTTCAATTGGGTTTTGTGCGGCGGTTCCCTTTTGGGCCGTTGATATGGCGGGGTTTCTGCTTGATACTTTACGTGG CGCGACAATGGGTACGATATTCAATTCTACAATAGAAGCTGAAACCTCACTTTTTGGCTTGCTTTTCAGCCAGTTCTTGT GTGTTATTTTCTTTATAAGCGGCGGCATGGAGTTTATATTAAACATTCTGTATGAGTCATATCAATATTTACCACCAGGG CGTACTTTATTATTTGACCAGCAATTTTTAAAATATATCCAGGCAGAGTGGAGAACGCTTTATCAATTATGTATCAGCTT CTCTCTTCCTGCCATAATATGTATGGTATTAGCCGATCTGGCTTTAGGTCTTTTAAATCGGTCGGCACAACAATTGAATG TGTTTTTCTTCTCAATGCCGCTCAAAAGTATATTGGTTCTACTGACGCTCCTGATCTCATTCCCTTATGCTCTTCATCAC TATTTGGTTGAAAGCGATAAATTTTATATTTATCTAAAAGACTGGTTTCCATCTGTATGA Protein sequence : MAQQVNEWLIALAVAFIRPLSLSLLLPLLKSGSLGAALLRNGVLMSLTFPILPIIYQQKIMMHIGKDYSWLGLVTGEVII GFSIGFCAAVPFWAVDMAGFLLDTLRGATMGTIFNSTIEAETSLFGLLFSQFLCVIFFISGGMEFILNILYESYQYLPPG RTLLFDQQFLKYIQAEWRTLYQLCISFSLPAIICMVLADLALGLLNRSAQQLNVFFFSMPLKSILVLLTLLISFPYALHH YLVESDKFYIYLKDWFPSV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ssaT | NP_460386.1 | type III secretion system apparatus protein | Virulence | SPI-2 | Protein | 4e-99 | 100 |
| ssaT | CAA68201.1 | secretion system apparatus, SsaT | Virulence | SPI-2 | Protein | 3e-99 | 100 |
| ssaT | YP_216429.1 | secretion system apparatus protein SsaT | Virulence | SPI-2 | Protein | 5e-98 | 99 |
| ssaT | NP_456107.1 | putative type III secretion protein | Virulence | SPI-2 | Protein | 6e-98 | 99 |
| ssaT | NP_805092.1 | type III secretion protein | Virulence | SPI-2 | Protein | 6e-98 | 99 |
| YPO0272 | YP_002345354.1 | type III secretion apparatus protein | Virulence | Not named | Protein | 7e-45 | 52 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| ssaT | YP_005251925.1 | type III secretion system apparatus protein | VFG0521 | Protein | 2e-99 | 100 |
