Gene Information

Name : STMDT12_C43380 (STMDT12_C43380)
Accession : YP_005250034.1
Strain : Salmonella enterica T000240
Genome accession: NC_016860
Putative virulence/resistance : Virulence
Product : putative phage glycosyltransferase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4531079 - 4532008 bp
Length : 930 bp
Strand : -
Note : COG0463 Glycosyltransferases involved in cell wall biogenesis

DNA sequence :
ATGAAAATTTCATTAGTGGTTCCCGTCTTTAATGAAGAGGACGCGATCCCTATTTTCTATAAAACGGTCAGAGAATACAG
TTCACTTAAACCTTATAACGTTGAGATTATCTTCGTTAATGATGGGAGTCACGATGCGACTGAATCAATCATCAGCGCAT
TAGCTGTTGCCGATCCTCTTGTTGTTCCGATCTCATTTACCCGCAATTTTGGTAAAGAACCTGCACTTTTTGCCGGATTA
GATCACGCGACCGGAGATGTGGTGATCCCTATCGATGTTGATTTACAAGATCCCATCGAAGTAATCCCACATTTGATCAA
TAAATGGCAGGCTGGTGCAGAAATGGTGCTGGCTAAGCGTATCGATCGTTCAACGGATGGCCACCTGAAGCGTAAAAGCG
CTGAGTGGTTCTACAGGCTGCATAACAAAATCAGTACGCCAAAGATTGAAGAGAATGTCGGTGATTTTCGATTGATGTCG
CGCGAGATTGTAGAAAATATCAAGCTATTACCAGAACGTAACCTTTTCATGAAAGGTATACTTTCATGGGTTGGAGGTCA
AACAGATGTGGTCGAATATGCCCGTGCTGAACGTGTCGCAGGTAACTCAAAATTTAATGGCTGGAAACTCTGGAACCTGG
CGCTGGAGGGGATTACAAGTTTTTCTACTTTCCCTTTGCGTATCTGGATGTATATAGGAGTGAGCGTTTCTGCCCTCTCC
CTGATATATGCCATGTGGATGATCATTGATAAATTGATGTGGGGAAACCCTGTTCCTGGTTATCCTTCGCTTATGACCGC
GATTCTCTTCTTAGGCGGCATCCAGCTTATCGGCATAGGCATCATGGGTGAATATATCGGACGCGTTTACACGGAGGTGA
AGCAAAGACCCCGCTATATCGTGAAAAACAAAAAAACAATGATGGAATAA

Protein sequence :
MKISLVVPVFNEEDAIPIFYKTVREYSSLKPYNVEIIFVNDGSHDATESIISALAVADPLVVPISFTRNFGKEPALFAGL
DHATGDVVIPIDVDLQDPIEVIPHLINKWQAGAEMVLAKRIDRSTDGHLKRKSAEWFYRLHNKISTPKIEENVGDFRLMS
REIVENIKLLPERNLFMKGILSWVGGQTDVVEYARAERVAGNSKFNGWKLWNLALEGITSFSTFPLRIWMYIGVSVSALS
LIYAMWMIIDKLMWGNPVPGYPSLMTAILFLGGIQLIGIGIMGEYIGRVYTEVKQRPRYIVKNKKTMME

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
gtrBI AAF09026.1 GtrBI Not tested SHI-O Protein 7e-116 83
ESA_03027 YP_001439092.1 hypothetical protein Not tested Not named Protein 3e-114 81

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
STMDT12_C43380 YP_005250034.1 putative phage glycosyltransferase VFG0670 Protein 6e-117 83