Gene Information

Name : STMDT12_C42390 (STMDT12_C42390)
Accession : YP_005249935.1
Strain : Salmonella enterica T000240
Genome accession: NC_016860
Putative virulence/resistance : Unknown
Product : ATP-dependent protease peptidase subunit
Function : -
COG functional category : -
COG ID : -
EC number : 3.4.25.1
Position : 4405580 - 4406110 bp
Length : 531 bp
Strand : -
Note : COG5405 ATP-dependent protease HslVU (ClpYQ), peptidase subunit

DNA sequence :
GTGACAACAATAGTAAGCGTACGCCGTAACGGCCACGTGGTAATCGCCGGTGATGGTCAGGCCACACTGGGTAACACAGT
AATGAAAGGCAACGTGAAGAAAGTCCGCCGCCTCTACAACGACAAGGTCATTGCGGGCTTTGCGGGCGGTACTGCGGATG
CATTCACGCTGTTCGAGCTGTTTGAACGTAAACTGGAAATGCATCAGGGGCACCTGGTCAAAGCCGCCGTTGAACTGGCG
AAAGACTGGCGTACCGACCGTATGCTACGCAAACTGGAAGCGTTGCTGGCCGTCGCGGATGAAACCGCCTCGCTCATCAT
CACGGGTAACGGCGATGTCGTGCAACCTGAAAACGATTTAATTGCTATCGGCTCCGGCGGTCCTTATGCCCAGGCTGCCG
CTCGCGCTCTGTTGGAAAATACCGAGCTCGGCGCGCGCGAAATTGCTGAAAAGGCGTTGGATATTGCAGGCGATATCTGC
ATTTACACCAACCATTTCCACACCATTGAAGAATTGACCGCCAAAGCGTAA

Protein sequence :
MTTIVSVRRNGHVVIAGDGQATLGNTVMKGNVKKVRRLYNDKVIAGFAGGTADAFTLFELFERKLEMHQGHLVKAAVELA
KDWRTDRMLRKLEALLAVADETASLIITGNGDVVQPENDLIAIGSGGPYAQAAARALLENTELGAREIAEKALDIAGDIC
IYTNHFHTIEELTAKA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hslV YP_003728752.1 protein HslV Not tested cag PAI Protein 4e-31 52