Gene Information

Name : STMDT12_C39210 (STMDT12_C39210)
Accession : YP_005249617.1
Strain : Salmonella enterica T000240
Genome accession: NC_016860
Putative virulence/resistance : Virulence
Product : transposition modulator TnpM
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4072242 - 4072826 bp
Length : 585 bp
Strand : -
Note : -

DNA sequence :

ATGCGCTGCCGCCCCTCACTAGTGAGAGGTAGGGCAGCGCAAGTCAATCCTGGCGGATTCACTACCCCTGCGCGAAGGCC
ATCGGTGCCGCATCGAACGGCCGGTTGCGGAAAGTCCTCCCTGCGTCCGCTGATGGCCGGCAGCAGCCCGTCGTTGCCTG
ATGGATCCAACCCCTCCGCTGCTATAGTGCAGTCGGCTTCTGACGTTCAGTGCAGCCGTCTTCTGAAAACGACAATGGAG
GTGGTAGCCGAGGGTGTGGAAACACCCGACTGCCTTGCGTGGTTGCGGCAGGCGGGTTGCGACACGGTGCAGGGTTTCCT
GTTCGCCAGGCCGATGCCGGCGGCGGCCTTCGTCGGCTTCGTCAACCAATGGAGGAACACCACCATGAACGCCAATGAAC
CGAGCACCAGTTGCTGCGTGTGCTGCAAGGAAATCCCGCTCGATGCCGCCTTCACGCCGGAAGGGGCCGAGTACGTGGAG
CATTTCTGCGGGCTGGAGTGCTATCAGCGCTTCCAGGCGCGGGCCAGCACTGCGACCGAAACCAGCGTCAAACCGGACGC
TTGTGATTCGCCGCCGTCAGGTTGA

Protein sequence :

MRCRPSLVRGRAAQVNPGGFTTPARRPSVPHRTAGCGKSSLRPLMAGSSPSLPDGSNPSAAIVQSASDVQCSRLLKTTME
VVAEGVETPDCLAWLRQAGCDTVQGFLFARPMPAAAFVGFVNQWRNTTMNANEPSTSCCVCCKEIPLDAAFTPEGAEYVE
HFCGLECYQRFQARASTATETSVKPDACDSPPSG

• Homologs from PAI DB

Gene	GenBank Accn	Product	Virulance or Resistance	PAI or REI	Alignment Type	E-val	Identity
tnpM	YP_001844880.1	hypothetical protein	Not tested	AbaR20	Protein	1e-64	100
tnpM	YP_005797129.1	transposase	Not tested	AbaR4e	Protein	1e-64	100
tnpM	YP_005797144.1	transposase	Not tested	AbaR4e	Protein	1e-64	100
tnpM	AAL08438.1	TnpM	Not tested	SRL	Protein	4e-86	100
tnpM	CAJ77081.1	Transposase	Not tested	AbaR1	Protein	6e-86	100

• Homologs from VFDB (virulence genes)

Gene	GenBank Accn	Product	ID of source DB	Alignment Type	E-val	Identity
STMDT12_C39210	YP_005249617.1	transposition modulator TnpM	VFG1029	Protein	2e-86	100