Gene Information

Name : STMDT12_C39100 (STMDT12_C39100)
Accession : YP_005249606.1
Strain : Salmonella enterica T000240
Genome accession: NC_016860
Putative virulence/resistance : Resistance
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4062380 - 4062973 bp
Length : 594 bp
Strand : +
Note : COG1309 Transcriptional regulator

DNA sequence :

ATGGAAAATAAAAATCATCAACAAGAAAATTTTAAGAGTACCTATCAATCACTGGTTAACTCAGCACGAATATTGTTTGT
TGAAAAAGGCTATCAAGCTGTTTCAATAGATGAGATCTCGGGAAAAGCGTTGGTGACCAAAGGTGCCTTTTATCATCACT
TTAAAAATAAAAAACAATTACTCAGTGCCTGTTATAAGCAGCAATTAATTATGATTGATGCCTACATCACAACAAAAACT
GATTTAACAAATGGTTGGTCTGCCTTAGAAAGTATATTTGAACATTATCTTGATTATATTATTGATAATAATAAAAACCT
TATCCCTATCCAAGAAGTGATGCCTATCATTGGTTGGAATGAGCTTGAAAAAATTAGCCTTGAATACATTACTGGTAAGG
TAAACGCCATTGTCAGCAAATTGATCCAAGAGAACCAACTTAAAGCTTATGATGATGATGTGCTTAAAAACTTACTCAAT
GGCTGGTTTATGCATATCGCAATACATGCGAAAAACCTAAAAGAGCTTGCCGATAAAAAAGGCCAATTTATTGCTATTTA
CCGCGGCTTTTTATTGAGCTTGAAAGATAAATAA

Protein sequence :

MENKNHQQENFKSTYQSLVNSARILFVEKGYQAVSIDEISGKALVTKGAFYHHFKNKKQLLSACYKQQLIMIDAYITTKT
DLTNGWSALESIFEHYLDYIIDNNKNLIPIQEVMPIIGWNELEKISLEYITGKVNAIVSKLIQENQLKAYDDDVLKNLLN
GWFMHIAIHAKNLKELADKKGQFIAIYRGFLLSLKDK

• Homologs from PAI DB

Gene	GenBank Accn	Product	Virulance or Resistance	PAI or REI	Alignment Type	E-val	Identity
tetC	AAL08446.1	putative transcriptional regulator TetC	Not tested	SRL	Protein	3e-87	100
tetC	AEA34666.1	tetracycline resistance protein C	Not tested	Not named	Protein	3e-87	100

• Homologs from CARD and BacMet (resistance genes)

Gene	GenBank Accn	Product	ID of source DB	Alignment Type	E-val	Identity
STMDT12_C39100	YP_005249606.1	hypothetical protein	NC_010558.1.6275977.	Protein	1e-87	100

• Homologs from VFDB (virulence genes)

Gene	GenBank Accn	Product	ID of source DB	Alignment Type	E-val	Identity
STMDT12_C39100	YP_005249606.1	hypothetical protein	VFG1037	Protein	1e-87	100