Name : STMDT12_C38610 (STMDT12_C38610) Accession : YP_005249557.1 Strain : Salmonella enterica T000240 Genome accession: NC_016860 Putative virulence/resistance : Virulence Product : SitD Function : - COG functional category : - COG ID : - EC number : - Position : 4025853 - 4026710 bp Length : 858 bp Strand : - Note : COG1108 ABC-type Mn2+/Zn2+ transport systems, permease components DNA sequence : ATGATGGCATTATTACTGGAGCCACTGCAGTTCACCTTTATGAGTCACGCACTGCTGATTTCACTGGTTGTTTCCATACC CTGTGCGCTGCTGTCGGTCTTTCTGGTCCTGAAAAGTTGGGCACTGATGGGTGACGCGATGAGTCATGCGGTTTTTCCTG GCATCGTGCTTGCCTGGATTCTGGGGTTACCTCTGGCTACAGGGGCATTCGTCGCCGGAGTATTCTGTGCGGTGGCGACG GGATACCTGAAAGACAACAGCCGAATCAAGCAAGATACAGTGATGGGGATTGTTTTTTCTGGCATGTTTGCCGCAGGTCT GATCTTGTATATTGCAGTCAAACCAGACGTACATCTTGATCATATTCTTTTCGGCGACATGCTCGGGATAACCATCGGCG ATATAATCCAGACGGTGATTATTGCCGGACTGGTTACACTTGTTATTAGCGTAAAATGGCGGGATTTTTTGCTGTTCAGC TTTGATTATCAACAGGCGCAGGCAAGCGGTTTGCATACGAGATGGCTGCATTATGGGCTGCTGTGCATGGTCTCCCTGAC CATTGTGGCGACGCTGAAAGCGGTAGGTATCATTCTCTCTATTTCTCTTCTCATTGCGCCTGGTGCCATTGCGGTACTCC TGACACAACGCTTTCATATTGCGCTCCTGCTGGCGACTGGCATATCGATATTGGTCTCAATGACTGGTGTCTGGCTGTCC TTTTTTATCGACAGCGCGCCAGCTCCGACAATTGTTGTCTTATTCGCGGTCATGTTCATCATGACGTTTACCGTTACCAG CATCAACGCACGCACAAAGGAAAATGCCGAACCACGGGATTTGTTATCATCCGATTAG Protein sequence : MMALLLEPLQFTFMSHALLISLVVSIPCALLSVFLVLKSWALMGDAMSHAVFPGIVLAWILGLPLATGAFVAGVFCAVAT GYLKDNSRIKQDTVMGIVFSGMFAAGLILYIAVKPDVHLDHILFGDMLGITIGDIIQTVIIAGLVTLVISVKWRDFLLFS FDYQQAQASGLHTRWLHYGLLCMVSLTIVATLKAVGIILSISLLIAPGAIAVLLTQRFHIALLLATGISILVSMTGVWLS FFIDSAPAPTIVVLFAVMFIMTFTVTSINARTKENAEPRDLLSSD |
Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
sitD | NP_461785.1 | permease | Virulence | SPI-1 | Protein | 7e-76 | 67 |
sitD | AAD41068.1 | SitD | Virulence | centisome 63 pathogenicity island | Protein | 6e-76 | 67 |
sitD | YP_217784.1 | iron transporter: fur regulated | Virulence | SPI-1 | Protein | 2e-75 | 67 |
sitD | NP_457258.1 | Iron transport protein, inner membrane component | Virulence | SPI-1 | Protein | 1e-75 | 67 |
sitD | NP_806467.1 | iron transporter inner membrane protein | Virulence | SPI-1 | Protein | 1e-75 | 67 |
Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
STMDT12_C38610 | YP_005249557.1 | SitD | BAC0352 | Protein | 3e-76 | 67 |
STMDT12_C38610 | YP_005249557.1 | SitD | BAC0442 | Protein | 2e-55 | 52 |
Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
STMDT12_C38610 | YP_005249557.1 | SitD | VFG0528 | Protein | 3e-76 | 67 |