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Name : STMDT12_C36020 (STMDT12_C36020) Accession : YP_005249298.1 Strain : Salmonella enterica T000240 Genome accession: NC_016860 Putative virulence/resistance : Virulence Product : ribokinase Function : - COG functional category : - COG ID : - EC number : - Position : 3739639 - 3740853 bp Length : 1215 bp Strand : + Note : COG1349 Transcriptional regulators of sugar metabolism DNA sequence : ATGAAATTTGAACGCCATCATAGAATATTGAAGGAACTCAGTATTTCGGGAGTTGTAAAAGTTTCAAATCTGGCGAAAAG TCTCAAGGTAACAAAGGAAACTATTCGTTCAGATCTCAATGAACTTGCCGGACAGGGATATCTTACTCGCTGTCATGGTG GTGCATTTATTACCCTTGATTCTCTTGATAACGTCGCAAAAAATGAAATTGCTTATGTGCTGGAAAAATATGAATCAGCG CAGAAAATAAAAAAAGGTCTCTCTGCCATGAAAAATAATGTATGTGTTATTGGCTCGTTCAATGTTGATATTATCAGTTA TCTACCGAGATTACCCTCAACGGGAGAATCATTGCTGGCCGATAAATTTATTTTTTCACCCGGCGGTAAGGGATGTAATC AGGCATTAGCAGCAAGCTATGCCGATTCTGATGTGCATTTTATTACTAAAGTCGGCTCAGATCATTTTAGTGATTACGCC ATTAATTTTATAAACTCATCAAAAATCCATAAAAGTGTTATCTACCAGACCAAAGAAACACAAACAGGTACAGCAACCAT CATGGTGAATGGAGATACCGGAGATAACGTCATCGCTATCTACCCTGGCGCCAACATGACAATTTCCCCTGATGAAATCA CCATTCAGAAAGAAGCCATTGTTCATTCAGATATTGTTCTTGTCCAACTGGAGACGAATTACGAAGCGCTGCAGCAAACA ATTCGTCTCGCACAAAAAAATGACATACCGGTCATCATCAATCCAGCGCCGTACAATGACATGGTTAACACCATCATTGA TAACATTGATTATATTACGCCAAATGAAACGGAAGCAGGCCTGCTGGCCAATATGGCGGTTAATGATATCGAATCAGCCA AATGCGCGGCCAAAATTATTCATCAGAAAGGCGTCAAAAATACCATTATTACATTAGGTAGCAAAGGTTCGCTTGCTTAT GATGGCACACAATTCATCTATTCCCCGGCATTTCCGGCAGTTGTAAAAAATACGGCGGGAGCGGGTGACGCTTTCAATGG CGCCCTCGCATCTGGTCTTGCAAAAGGAAAGTCACTGGCATCCGCATTGTGCTACGCCAGCGCATTTGCCTCACTTGCGG TTGAAACGCCTAATGCCTCTGATATGCCGGAAAACGACTCCGTTCTTCATCGTATTCAGGGTTCACATTACAAACAAACT ATCTCTACTCACTAA Protein sequence : MKFERHHRILKELSISGVVKVSNLAKSLKVTKETIRSDLNELAGQGYLTRCHGGAFITLDSLDNVAKNEIAYVLEKYESA QKIKKGLSAMKNNVCVIGSFNVDIISYLPRLPSTGESLLADKFIFSPGGKGCNQALAASYADSDVHFITKVGSDHFSDYA INFINSSKIHKSVIYQTKETQTGTATIMVNGDTGDNVIAIYPGANMTISPDEITIQKEAIVHSDIVLVQLETNYEALQQT IRLAQKNDIPVIINPAPYNDMVNTIIDNIDYITPNETEAGLLANMAVNDIESAKCAAKIIHQKGVKNTIITLGSKGSLAY DGTQFIYSPAFPAVVKNTAGAGDAFNGALASGLAKGKSLASALCYASAFASLAVETPNASDMPENDSVLHRIQGSHYKQT ISTH |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| APECO1_1076 | YP_853096.1 | carbohydrate kinase | Not tested | PAI IV APEC-O1 | Protein | 7e-156 | 81 |
| rbsk | YP_216390.1 | DeoR family transcriptional regulator | Not tested | SPI-2 | Protein | 3e-71 | 48 |
| orf408 | NP_460347.1 | regulatory protein | Not tested | SPI-2 | Protein | 2e-71 | 48 |
| ORF 408 | CAB37417.1 | - | Not tested | SPI-2 | Protein | 1e-71 | 48 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| STMDT12_C36020 | YP_005249298.1 | ribokinase | VFG0483 | Protein | 9e-72 | 48 |
