Gene Information

Name : STMDT12_C34260 (STMDT12_C34260)
Accession : YP_005249122.1
Strain : Salmonella enterica T000240
Genome accession: NC_016860
Putative virulence/resistance : Unknown
Product : putative DNA-binding transcriptional regulator
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3556580 - 3557491 bp
Length : 912 bp
Strand : +
Note : COG0583 Transcriptional regulator

DNA sequence :
ATGTCGGTATTCGCCAAAGTTGTCGAGTTTGGCTCTTTTACCGCCGCAGCCAGACAGCTGCAAATGAGCGTATCGTCCAT
CAGCCAGACTGTGGCGAAACTGGAAGATGAGCTTCAGGTTAAATTGCTCAACCGCAGCACACGCAGCATTGGGCTCACCG
AAGCTGGAAAAATCTATTATCAGGGCTGTCGTCGTATGCTGCATGAAGTGCAGGATGTTCACGAGCAGCTTTACGCTTTT
AATAACACGCCTATCGGTACATTGCGTATCGGCTGTTCTTCAACCATGGCGCAAAATGTGCTGGCCGGGCTTACCGCAAA
ATTATTAAAAGAGTATCCCGGTCTGGCGGTCAATCTGGTGACAGGAATTCCGGCCCCGGATTTAATTGCCGACGGGCTGG
ACGTGGTGATCCGCGTGGGCGCGCTGCAAGACTCCAGCCTGTTTTCCCGTCGACTCGGCGCGATGCCGATGGTTGTGTGC
GCCGCCAAGCCGTACCTCGCTCAGTACGGCGTCCCGGAAAAACCCGCCGATCTCAGTAGCCATTCCTGGCTGGAATATAG
CGTGCGCCCGGATAATGAGTTTGAACTTATCGCGCCGGAAGGAATTTCTACCCGACTGATTCCACAGGGGCGGTTCGTCA
CTAACGATCCGATGACGCTGGTACGCTGGCTGACCGCCGGAACCGGAATCGCTTATGTGCCGCTGATGTGGGTGATCGAT
GAGATCAATCGTGGCGATCTGGAGATCCTGCTGCCTCGCTATCAGTCCGATCCCCGTCCGGTGTACGCGCTGTACACCGA
AAAAGATAAGCTGCCGCTTAAAGTGCAGGTAGTGATTAACGCGTTAACTGACTATTTTGTCGATGTCGCACACCTGTTTC
AGGGAATGCACGGGCGAGGGAAAGAAAAATAA

Protein sequence :
MSVFAKVVEFGSFTAAARQLQMSVSSISQTVAKLEDELQVKLLNRSTRSIGLTEAGKIYYQGCRRMLHEVQDVHEQLYAF
NNTPIGTLRIGCSSTMAQNVLAGLTAKLLKEYPGLAVNLVTGIPAPDLIADGLDVVIRVGALQDSSLFSRRLGAMPMVVC
AAKPYLAQYGVPEKPADLSSHSWLEYSVRPDNEFELIAPEGISTRLIPQGRFVTNDPMTLVRWLTAGTGIAYVPLMWVID
EINRGDLEILLPRYQSDPRPVYALYTEKDKLPLKVQVVINALTDYFVDVAHLFQGMHGRGKEK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tcaR1 CAI77370.1 putative lysR-family transcriptional regulator Not tested tc-PAIYe Protein 3e-118 81