Gene Information

Name : STMDT12_C29110 (STMDT12_C29110)
Accession : YP_005248607.1
Strain : Salmonella enterica T000240
Genome accession: NC_016860
Putative virulence/resistance : Virulence
Product : iron transport protein, ATP-binding component
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3030712 - 3031533 bp
Length : 822 bp
Strand : +
Note : COG1121 ABC-type Mn/Zn transport systems, ATPase component

DNA sequence : 
ATGAGTCAATCTGCGATTACCGTTGATCAAGTCACGGTGACGTATCGCAACGGTCATACCGCCCTACGGGACGCCACTTT
TCAGGTGCCTGGCGGTTCAATCGCCGCGCTGGTAGGCGTAAATGGTTCCGGTAAGTCTACGTTATTTAAAGCGTTAATGG
GCTTTGTGCATCTTGCGCAGGGCGATATCACTATCCTGCAACAGTCAGTCAACAAGGCACTGAAAAAAAACCTCATTGCT
TATGTTCCGCAATCGGAAGAAGTGGACTGGTCATTTCCGGTGCTGGTAGAAGATGTGGTGATGATGGGACGCTACGGCCA
TATGGGCTGGCTACGCCGTCCCACTGCGCATGATCACGCCTGTGTTGACGCCGCGCTGGCGCGGGTGGATATGCAGGAGT
ATCGTCACAGGCAGATTGGCGAGCTGTCCGGCGGGCAGAAAAAACGTGTGTTTCTTGCCAGGGCCATCGCTCAGGATGGA
CAGGTGATCCTGCTGGATGAACCTTTTACCGGCGTGGATGTAAAAACCGAAGCGCGAATCATCGATCTACTGCGGGAACT
GCGCGATGAAGGCCGCACGATGCTGGTCTCAACGCATAATCTCGGCTCCGTCACCGAGTTTTGCGACTATACGGTAATGA
TTAAAGGAACCGTACTGGCCAGCGGCCCTACCGAAACCACGTTTACCGCCGCGAATCTGGAACAGGCGTTTAGCGGCGTT
CTACGTCATATCGCGTTAAGCGGAGGTGAAGAGCACATCATCACCGATGACGAGCGCCCCTTTATTTCCCGGCGCGTGGC
CAGCGGAGGAAAATCGTCATGA

Protein sequence : 
MSQSAITVDQVTVTYRNGHTALRDATFQVPGGSIAALVGVNGSGKSTLFKALMGFVHLAQGDITILQQSVNKALKKNLIA
YVPQSEEVDWSFPVLVEDVVMMGRYGHMGWLRRPTAHDHACVDAALARVDMQEYRHRQIGELSGGQKKRVFLARAIAQDG
QVILLDEPFTGVDVKTEARIIDLLRELRDEGRTMLVSTHNLGSVTEFCDYTVMIKGTVLASGPTETTFTAANLEQAFSGV
LRHIALSGGEEHIITDDERPFISRRVASGGKSS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitB NP_461783.1 ATP-binding protein Virulence SPI-1 Protein 6e-128 100
sitB AAD41066.1 SitB Virulence centisome 63 pathogenicity island Protein 4e-128 100
sitB NP_457256.1 Iron transport protein, ATP-binding component Virulence SPI-1 Protein 3e-126 99
sitB NP_806465.1 iron ABC transporter ATP-binding protein Virulence SPI-1 Protein 3e-126 99
sitB YP_217782.1 iron transporter: fur regulated Virulence SPI-1 Protein 1e-127 99

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
STMDT12_C29110 YP_005248607.1 iron transport protein, ATP-binding component BAC0350 Protein 3e-128 100
STMDT12_C29110 YP_005248607.1 iron transport protein, ATP-binding component BAC0440 Protein 7e-80 63
STMDT12_C29110 YP_005248607.1 iron transport protein, ATP-binding component BAC0400 Protein 5e-49 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
STMDT12_C29110 YP_005248607.1 iron transport protein, ATP-binding component VFG0526 Protein 2e-128 100