Gene Information

Name : STMDT12_C28270 (STMDT12_C28270)
Accession : YP_005248523.1
Strain : Salmonella enterica T000240
Genome accession: NC_016860
Putative virulence/resistance : Virulence
Product : putative glycosyl transferase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2939943 - 2941058 bp
Length : 1116 bp
Strand : +
Note : COG1819 Glycosyl transferases, related to UDP-glucuronosyltransferase

DNA sequence :
ATGCGTATTCTGTTTGTCGGTCCACCACTGTATGGACTGCTATACCCTGTGCTGTCTCTGGCGCAAGCGTTTCGTGTTAA
TGGCCATGAAGTACTGATTGCAAGCGGTGGCAAATTTGCACAGAAAGCAGCCGAAGCTGGGTTGGTGGTATTTGACGCTG
CGCCTGGTTTCGATTCGGAAGCGGGTTATCGCCGTCAGGAGGCATTACGAAAAGAAAATAACATTGGAACAAAAATGGGG
AACTTCTCATTCTTCAGCGAAGAGATGACTGACCCGCTGGTCGCGTTCGCCGGGCAGTGGCGACCAGATCTCATCGTCTA
CCCTCCCCTTGGGGTCGTTGGACCACTGATTGCCGCTAAGTATGACATTCCGGTAGTGATGCAAACCGTCGGCTTCGGTC
ATACGCCCTGGCACATCAAAGGCGTGACGAAATCACTTTCTAACGCCTACCGCCGCCATGGGGTCAGCGCGCCACCAAGA
GATCTGGCGTGGATAGACGTCACACCGCCCAGCATGAGCATACTGCAAAATGACGGAGAGCCGGTTATCTCCATGCAATA
CGTCCCGTATAACGGCGGCGCCGTCTGGGAAGAATGGTGGGAACGTACACCTGATCGCAAGCGTCTTCTGGTCAGCCTCG
GCACCGTCAAACCGATGGTGGATGGCCTGGATCTGATTTCCTGGGTAATGGATTCTGCCGGCGAAGTAGATGCCGAAATC
ATCCTGCATCTTCCGGCAAACGCCCGCTCGGATTTACGTTCACTGCCGCCGAATGTCCGTCTGGTCGACTGGCTTCCGAT
GGGCGTTTTCCTTAACGGCGCCGACGGTTTTATCCACCATGGCGGCGCAGGCAACACCCTGACGGCGCTGCATGCCGGCA
TTCCGCAGATAGTCTTTGGCCAGGGTGCCGACAGACCCGTCAATGCCCGCGCCGTGGTCGAGCGCGGATGCGGCATTATT
CCCGGTAAGAGCGGGCTTACGAGCAGCATGATTAATACCTTCCTCGGTAATCGCGCGCTTCGCGAGGCGTCGCAGGAGGT
CGCGGCGGAAATGGCGGCCCAGCCTTGCCCGACCGAGGTGGCAAAAAAACTGATCGCCATGCTGCAACACGGCTAA

Protein sequence :
MRILFVGPPLYGLLYPVLSLAQAFRVNGHEVLIASGGKFAQKAAEAGLVVFDAAPGFDSEAGYRRQEALRKENNIGTKMG
NFSFFSEEMTDPLVAFAGQWRPDLIVYPPLGVVGPLIAAKYDIPVVMQTVGFGHTPWHIKGVTKSLSNAYRRHGVSAPPR
DLAWIDVTPPSMSILQNDGEPVISMQYVPYNGGAVWEEWWERTPDRKRLLVSLGTVKPMVDGLDLISWVMDSAGEVDAEI
ILHLPANARSDLRSLPPNVRLVDWLPMGVFLNGADGFIHHGGAGNTLTALHAGIPQIVFGQGADRPVNARAVVERGCGII
PGKSGLTSSMINTFLGNRALREASQEVAAEMAAQPCPTEVAKKLIAMLQHG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
iroB CAD66179.1 IroB protein Virulence PAI III 536 Protein 6e-151 87
join NP_287133.1 glycosyl transferase Not tested TAI Protein 6e-123 73
Z1190 NP_286725.1 glucosyltransferase Not tested TAI Protein 1e-123 73

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
STMDT12_C28270 YP_005248523.1 putative glycosyl transferase VFG1654 Protein 4e-151 87