Gene Information

Name : STMDT12_C27600 (STMDT12_C27600)
Accession : YP_005248456.1
Strain : Salmonella enterica T000240
Genome accession: NC_016860
Putative virulence/resistance : Unknown
Product : phage tail-like protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2879731 - 2880639 bp
Length : 909 bp
Strand : -
Note : COG3948 Phage-related baseplate assembly protein

DNA sequence :
ATGGCAGTCATTGACCTTTCCCGGTTACCGCCGCCACAGATAGTGGACGTGCCGGATTTTGAGACGCTGCTGGCTGAGCG
CAAGGCCGCTTTTGTGGCTCTTTATCCTGTGGATGAACAGGACGCGGTGCGGCGCACGCTGGCGCTGGAATCTGAACCCG
TCACCAAGCTGCTGCAGGAAAGCACATACCGCGAAATCCTGCTGCGCCAGCGTATTAACGAGGCTGCGCAGGCGGTGATG
GTGGCCTATTCGATGGGAAATGATCTTGAGCAGCTGGCAGCCAACTGCAACGTGAAACGTCTGACGGTAGTTCCTGCTGA
TAATGATGCAGTACCGCCGGTCACCGCAGTGATGGAAGATGATGAGGCGCTGCGCCAGCGCATCCCTGCAGCATTTGAGG
GACTGTCCGTTGCTGGCCCTACGGGAGCCTATGAATTTCACGCCAGAAGTGCGGACGGACGTGTGGCAGATGCCAGCGCA
ACCAGTCCGGCCCCTGCAGAGGTGGTACTTACCGTGCTGAGCCGTGAGGGTGACGGTACAGCAGTAAAAGACCTGCTGGA
TGTGGTTGAAAAAGCCCTGAACAGTGAGAGTGTACGCCCGGTGGCTGACCGTCTGACGGTTCGTAGTGCGGAGATCATAC
CGTACCGGGTGGAGGCTACCATTTTTCTTTATCCAGGGCCGGAAGCGGAGCCTGTTATGGTGGCGGCAAAAGCCAGTCTG
CAGAGGTACATCGCCAGTCAGACGCGGCTGGGACGTGATATCCGCCGCAGCGCCATTTATGCCGCGTTGCACGTGGAGGG
CGTCCAGCGTGTGGAGCTGACGTCCCCTCTGGAGGATGTGGTGCTGGATAAGACACAGGCGGCATCCTGTACCGAATGGA
GCGTTACCAACGGGGGCACGGATGAATAG

Protein sequence :
MAVIDLSRLPPPQIVDVPDFETLLAERKAAFVALYPVDEQDAVRRTLALESEPVTKLLQESTYREILLRQRINEAAQAVM
VAYSMGNDLEQLAANCNVKRLTVVPADNDAVPPVTAVMEDDEALRQRIPAAFEGLSVAGPTGAYEFHARSADGRVADASA
TSPAPAEVVLTVLSREGDGTAVKDLLDVVEKALNSESVRPVADRLTVRSAEIIPYRVEATIFLYPGPEAEPVMVAAKASL
QRYIASQTRLGRDIRRSAIYAALHVEGVQRVELTSPLEDVVLDKTQAASCTEWSVTNGGTDE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY4613 NP_458695.1 probable phage baseplate assembly protein Not tested SPI-7 Protein 5e-125 97
t4307 NP_807903.1 phage baseplate assembly protein Not tested SPI-7 Protein 5e-125 97
unnamed ABR13480.1 predicted baseplate or tail fiber base Not tested PAGI-6 Protein 2e-57 54