Gene Information

Name : STMDT12_C27470 (STMDT12_C27470)
Accession : YP_005248443.1
Strain : Salmonella enterica T000240
Genome accession: NC_016860
Putative virulence/resistance : Unknown
Product : late control-like protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2868281 - 2869381 bp
Length : 1101 bp
Strand : -
Note : COG3500 Phage protein D

DNA sequence :
GTGAACTTTAATTCTGATCTCCTGAATCTGAACAGCAAAAGCCCGGCTTTCAGTATCACCATCGAAGGCAAAGACGTGAC
GACGGTGATGGACGCGCGCCTGATGAGTCTGACACTGACGGATAACCGGGGCTTTGAAGCAGACCAGCTTGATCTGGAGC
TGGACGACGCCGACGGGCAGATCGTTCTGCCGCGCCGTGGTGCTGTTATTCATCTGGCGCTGGGCTGGAAAGGCCAGCCG
CTTTTCCCTAAAGGGGCTTTTACCGTAGATGAAATTGAACACAGCGGAGCCCCTGACCGGCTGACCATCAGGGCGCGTAG
CGCAGATTTCCGTGAAACCCTCAATACACGGCGCGAAAAATCATGGCATCAGACAACGGTGGGGGAGGTGGTAAAGGAAA
TCGCCGCCCGGCATAACCTCAAAGTGGCGCTGGGTCAAGACCTGACGGATAAGGCGCTGGATCATATGGACCAGACCAAT
GAAAGCGATGCAAGTTTTCTGATGAAACTGGCGAGACAGTATGGGGCGATTGCTTCCGTTAAAGACGGGAACCTGCTGTT
TATCCGGCAGGGACAGGGAAGAACGGCAAGCGGCAAGCCGCTGCCGGTTATCACCATCACGCGCAAAGCCGGTGACGGTC
ATCGGTTCACCCTTGCTGATCGTGGTGCCTATACCGGTGTTATTGCCAGCTGGTTGCATACGCGTGAACCCAGGAAAAAA
GAGACAACCAGTGTTAAGCGTCGTCGAAAGAAAGCCACCACACCCAAAGAGCCGGAAGCAAAACAGGGTGATTATCTGGT
GGGAACGGATGAAAACGTGTTGGTTCTTAATCGTACCTACGCCAACCGGAGCAATGCAGAGCGCGCAGCAAAAATGCAGT
GGGAACGCCTGCAGCGCGGGGTTGCTTCATTTTCCCTACAGCTCGCTGAGGGGCGGGCTGATCTCTATACGGAAATGCCG
GTGAAGGTGACGGGATTTAAGCAGCCGATTGATGATGCAGAATGGACCATTACCACCCTGACGCATTCTGTCAGCCCGGA
TAATGGATTTACGACCAGCATGGAGCTTGAAGTAAAGATTGATGATCTTGAAATTGAATGA

Protein sequence :
MNFNSDLLNLNSKSPAFSITIEGKDVTTVMDARLMSLTLTDNRGFEADQLDLELDDADGQIVLPRRGAVIHLALGWKGQP
LFPKGAFTVDEIEHSGAPDRLTIRARSADFRETLNTRREKSWHQTTVGEVVKEIAARHNLKVALGQDLTDKALDHMDQTN
ESDASFLMKLARQYGAIASVKDGNLLFIRQGQGRTASGKPLPVITITRKAGDGHRFTLADRGAYTGVIASWLHTREPRKK
ETTSVKRRRKKATTPKEPEAKQGDYLVGTDENVLVLNRTYANRSNAERAAKMQWERLQRGVASFSLQLAEGRADLYTEMP
VKVTGFKQPIDDAEWTITTLTHSVSPDNGFTTSMELEVKIDDLEIE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY4601 NP_458684.1 putative regulator of late gene expression Not tested SPI-7 Protein 4e-158 96
t4295 NP_807892.1 regulator of late gene expression Not tested SPI-7 Protein 4e-158 96
unnamed ABR13490.1 phage late control D Not tested PAGI-6 Protein 8e-56 43