Gene Information

Name : STMDT12_C27150 (STMDT12_C27150)
Accession : YP_005248411.1
Strain : Salmonella enterica T000240
Genome accession: NC_016860
Putative virulence/resistance : Unknown
Product : putative phage-like protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2825853 - 2828510 bp
Length : 2658 bp
Strand : -
Note : COG0358 DNA primase (bacterial type)

DNA sequence :
ATGAACGCTACGATACAACGTGACGTTGTGCGCCGCCTTGTCCGTGACTTTGAATTTAAAGAAAAAGATAAATATTTGCA
GCAGGGCATATGCCCTGCCTGTCATAAACGTGAGTTATTTACCAGTATTGAGAAACCCTGGATTCTGAAATGTGGCCGCG
AAAATAACTGCGGTCATCAGGTCGTTGTTAAAGAGCTGTATTCAGATATTTTTGAAGACTGGTCTAAGCGTTATCAGGAC
ACGCCCGAAACCCCACATGCGGCGGCAGAAGCCTATCTGCGTGAGGCCAGAGGGCTGAATACGGAACCACTGAAAGGCAG
TTTTACCCAGGGCGCATTTGTGAAGGATGGTATGGGGTCTGCCACTGTCCGGTTTAAGTTGTCATGTGGTGCCATGTGGG
AGCGTATCATTGACCAGCCGCAGCGCTTCGGAAAACAAAAAGCGAATATCAAAGGAAGCTATGTTGGTCACTGGTGGGTA
CCGCCTTTTATTAACCTGCTGGAAGTGAACGAAATCTGGATCACCGAGGGCATTTTCAATGCACTGAGTCTTTGTCAGGC
TGGCTTACCTGCGGTGGCAACACTGAGCAGCAATAATTATCCGCTGGCCGCGCTGGATACACTGGCCAAAGAATTGGGTG
AAAAACCACGCCCGCGCCTTGTATGGGCGTTTGATGGTGATAAGGCCGGTACAAAACACACACTGGCTTTTGCTGCGCGC
AGTGATGCCGCCGGCTGGAAAACGCGCGCCGCGCAGCCGGTGAAATCATCGTCTTGCCTGGACTGGAATGATTTGCTGCT
ACGTGACCGTTTCAGTAAATCAGACATAAAAAATTACCGCTATTATGGCGATCTCCTGCTGGCGAAAAGCCCGACTGAAA
AAGCCCTTCTTATGCATCAACATAATGAATGGCATTCGTTTTATTTTGAGTATGGCTCACGTATGTACTGGTTTGAGCTG
GATCTTGACCGGTACACACGCGCACTGGATCGTATTACCAATACCGGAACCGAAGTCATACAGGAATGGGAGGCCAGAGA
AAAAGCTGTTAAAGAGTCCGGATGTGTCACGGAAATTGCCAACTGCTGGCTGACTCCCCTGTATTTCCAGCGTTCTGAAC
CCACGGACGAGTCCTGGTATTATGTGAAGGTGAATATGCCAGACAGACCGGCTGTGAAAGACACCTTCACAGCAAATCAG
CTTACCAGCTCCGCCGAGTTTAAAAAGCGGTTGTTGCATATTGCCAAAGGGGCTGTGTATACCGGGAGTACCAAACAGCT
GGATAAGTTTATTCAGATGCGTCTTCCCGAAATCAAAGAGGTTAAAACGCAGAATTTTATTGGTTACAACAAGGATTATT
CAGCGTGGTTGTTTAATCGTGTGGCCGTTTGCGATGGCCGGCTGTATGAAATGAATGACGAGGATTATTTCGAAATTAAC
CATGCAAGCGTAAAAAGCCTGAGTCTTACGCCTGTACTGGATCTGAATCCAAAGCTGAATGAATTTACCACAGGCTGGAT
TGACGATATCTGGACGGCGTTCGGTGAAAAAGGATATGTGGCGCTGGCGTTCTGGCTGGGGTCACTCTTTGCTGAACAAA
TCCGCGAACGTGACAAGTCATTTCCGTTTCTGGAGATTGTCGGCGAACCCGGAACGGGTAAATCAACGCTTATTGAGTTC
CTTTGGAAACTCGCTGGCCGTGAAGAATATGAAGGTTTTGATCCATCTAAATCGACGGCCGCAGCGCGCGGGCGTAACTT
TGCTCAGGTAAGTAACCTGCCGGTGGTGCTAATTGAAGGTGATCGCACCACGGACAACGCGAAACAGCGTGCTTTTGACT
GGGATGAACTGAAATCACTGTATAATGGTCGGGCATCCCGCGCAGTAGGCATCAAATCCAACAATAACGAGACATATGAA
CCGCCATTCAGGGGAAGTATCGTTATCGCACAGAACGCAGATACAGACGGCAGTAAGGCGTTTCTGGAGCGTATTATCCA
TATCTACACTGACAAACGTGGCCAGTCCATTCAGACGCGACATGCCGCAGAGCGGCTTGAACAAATCCCTGTCAGTCGGG
TGTCCGGATTCACGTTACTGGCGGCCATGCGTGAAAAAGAAATTATGGATACGTTCAGCAGGAGTTACGAACGCGCCCGT
AATGAACTGGAGTCTGATGCGGATATTCGCCATATTCGTATTGCAAAAAATCACGCGCAGCTGGCTGGTCTGCTGGATGC
GCTCGCGATTGTTGTAACGTTGCCGGTTGAGCGCATAGAAAAAACCCGTGCGGCTATCACTGCACTGGCCGTGGAACGCT
GCCAGGCACTTAAAAAGGATCATCCTATGGTTCAGGAGTTCTGGGAGTTGTTTGATTACCTGGATGAACTGGCACCTTAT
GGCATCAATCATTCGTCTGATGAGAATGAAATAGCGGTTAATTTTAACCACATGGAGGAAGTCGCCGCTGCACACCGGCA
GCGCATACCTTTTACCTTAACGGAAATCAAAAAGCTGCTTAAAAACGGTAATGAACGCCGTTTCATCAGGCAGGGAACCA
CACGCAGCGCAGTAAGTGAGCGTCATAATCGCGGTAAAGGGGATATGTCCAGAATGCCTGAGACCTTCCGGTGCTGGATA
TTTGGTCGAGAGAAATAA

Protein sequence :
MNATIQRDVVRRLVRDFEFKEKDKYLQQGICPACHKRELFTSIEKPWILKCGRENNCGHQVVVKELYSDIFEDWSKRYQD
TPETPHAAAEAYLREARGLNTEPLKGSFTQGAFVKDGMGSATVRFKLSCGAMWERIIDQPQRFGKQKANIKGSYVGHWWV
PPFINLLEVNEIWITEGIFNALSLCQAGLPAVATLSSNNYPLAALDTLAKELGEKPRPRLVWAFDGDKAGTKHTLAFAAR
SDAAGWKTRAAQPVKSSSCLDWNDLLLRDRFSKSDIKNYRYYGDLLLAKSPTEKALLMHQHNEWHSFYFEYGSRMYWFEL
DLDRYTRALDRITNTGTEVIQEWEAREKAVKESGCVTEIANCWLTPLYFQRSEPTDESWYYVKVNMPDRPAVKDTFTANQ
LTSSAEFKKRLLHIAKGAVYTGSTKQLDKFIQMRLPEIKEVKTQNFIGYNKDYSAWLFNRVAVCDGRLYEMNDEDYFEIN
HASVKSLSLTPVLDLNPKLNEFTTGWIDDIWTAFGEKGYVALAFWLGSLFAEQIRERDKSFPFLEIVGEPGTGKSTLIEF
LWKLAGREEYEGFDPSKSTAAARGRNFAQVSNLPVVLIEGDRTTDNAKQRAFDWDELKSLYNGRASRAVGIKSNNNETYE
PPFRGSIVIAQNADTDGSKAFLERIIHIYTDKRGQSIQTRHAAERLEQIPVSRVSGFTLLAAMREKEIMDTFSRSYERAR
NELESDADIRHIRIAKNHAQLAGLLDALAIVVTLPVERIEKTRAAITALAVERCQALKKDHPMVQEFWELFDYLDELAPY
GINHSSDENEIAVNFNHMEEVAAAHRQRIPFTLTEIKKLLKNGNERRFIRQGTTRSAVSERHNRGKGDMSRMPETFRCWI
FGREK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ABR13498.1 hypothetical protein Not tested PAGI-6 Protein 5e-168 41