Gene Information

Name : STMDT12_C26810 (STMDT12_C26810)
Accession : YP_005248377.1
Strain : Salmonella enterica T000240
Genome accession: NC_016860
Putative virulence/resistance : Unknown
Product : protein disaggregation chaperone
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2797517 - 2800090 bp
Length : 2574 bp
Strand : -
Note : COG0542 ATPases with chaperone activity, ATP-binding subunit

DNA sequence :
ATGCGTCTGGATCGTCTTACTAACAAATTCCAGCTTGCTCTTGCCGATGCCCAGTCGCTCGCGCTGGGGCACGACAACCA
ATTCATCGAACCTCTTCATTTAATGAGCGCCTTGCTGAACCAGGAAGGGGGATCGATACGTCCTTTATTAACCTCCGCCG
GCATTAATGCTGGCCAGTTGCGCACCGCTATCGATCAGGCGCTGAGCCGTTTACCGCAGGTGGAAGGCACCGGCGGCGAC
GTACAGCCTTCTTCGGAACTGGTACGCGTACTGAACCTTTGCGACAAGCTGGCGCAAAAACGGGGAGACAATTTTATTTC
GTCAGAGCTGTTTGTTCTGGCGGCGCTTGAGTCTCGCGGCACGTTAACCGATCTGCTGAAATCAGCCGGTGCGACCACGG
CCAATATCACTCAGGCAATTGAACAGATGCGCGGAGGTGAAAGCGTGAACGATCAAGGGGCTGAAGACCAACGTCAGGCC
TTGAAAAAATATACCGTCGATCTGACCGAGCGGGCTGAACAAGGCAAGCTTGACCCGGTAATTGGTCGTGATGAAGAAAT
TCGCCGTACCATTCAGGTACTGCAACGTCGTACCAAAAACAACCCGGTGTTAATCGGTGAGCCAGGGGTCGGTAAAACGG
CAATTGTTGAAGGACTGGCGCAGCGCATTATTAACGGTGAAGTCCCTGAAGGCTTAAAAGGTCGCCGCGTACTGGCGCTG
GATATAGGCGCGCTGGTGGCGGGGGCGAAATATCGCGGCGAATTTGAAGAGCGTCTGAAAGGCGTGCTGAACGATCTGGC
GAAACAGGAAGGCAACGTCATCCTGTTTATTGACGAGCTGCACACGATGGTTGGCGCAGGTAAGGCTGATGGCGCAATGG
ACGCCGGGAATATGCTGAAACCGGCGCTGGCGCGTGGTGAACTGCACTGTGTGGGCGCCACCACGCTGGATGAATACCGT
CAGTACATTGAAAAAGACGCGGCGCTGGAACGTCGTTTTCAAAAAGTGTTTGTCGCAGAACCTTCAGTGGAAGACACCAT
CGCTATTCTGCGTGGCCTGAAAGAACGTTACGAGCTGCACCACCATGTGCAGATCACTGACCCGGCGATTGTGGCGGCGG
CAACATTATCTCACCGCTATATCGCCGACCGTCAGTTGCCGGATAAAGCTATCGACCTCATCGATGAAGCTGCATCCAGC
ATTCGTATGCAGATTGACTCTAAGCCGGAGGAGCTGGACAGACTCGACCGCCGCATTATTCAGCTCAAACTGGAACAGCA
GGCGTTGATGAAAGAGTCTGACGAGGCGAGTAAAAAACGTCTCGATATGCTCAACGAAGAACTGGACGACAAAGAGCGCC
AGTATTCTGAGCTGGAAGAAGAGTGGAAAGCGGAAAAAGCGTCGCTCTCTGGTACGCAAACTATTAAAGCGGAGCTGGAG
CAGGCGAAGATTGCCATCGAGCAGGCGCGTCGCGTTGGCGACCTGGCGCGAATGTCTGAACTGCAGTACGGCAAAATTCC
GGAGCTGGAAAAACAGCTGGAAGCCGCGACCCAGTCGGAAGGTAAAACCATGCGTCTGTTACGTAACAAAGTAACGGATG
CGGAAATTGCCGAAGTGCTAGCGCGCTGGACCGGTATTCCGGTTTCCAGAATGCTGGAAGGCGAACGTGAAAAACTGTTG
CGTATGGAACAAGAGTTACACAGCCGTGTGATCGGGCAGAATGAAGCCGTTGAAGCAGTATCGAACGCCATACGTCGTAG
CCGTGCTGGGCTGTCCGATCCGAACCGTCCGATTGGTTCCTTCCTGTTCCTGGGGCCGACGGGGGTCGGTAAAACCGAAC
TGTGTAAAGCACTGGCTAACTTTATGTTCGACAGCGACGACGCGATGGTGCGTATCGACATGTCTGAGTTTATGGAGAAA
CACTCCGTGTCTCGTTTGGTCGGGGCGCCTCCGGGATATGTCGGCTATGAAGAAGGCGGTTATTTGACGGAAGCGGTGCG
CCGTCGCCCTTATTCCGTCATCTTGTTGGATGAAGTGGAAAAAGCGCATCCGGATGTATTCAACATTCTGTTGCAGGTGC
TGGACGACGGTCGACTGACTGACGGGCAGGGGAGAACGGTCGACTTCCGTAATACGGTGGTCATTATGACTTCTAACCTC
GGTTCCGATCTCATTCAGGAGCGCTTTGGCGAACTGGATTACGGTCGAATGAAAGAGATGGTGCTGGGTGTGGTTAGCCA
AAACTTCCGTCCGGAATTTATCAACCGTATTGATGAAGTTGTGGTATTCCATCCGTTAGGTGAACAACACATCGCTTCTA
TTGCTCAGATCCAGCTGCAGCGTCTGTACAAACGTCTGGAAGAACGTGGTTATGAAATCCATATCTCCGACGAGGCGCTG
AAACTGTTGAGCGCCAACGGTTACGATCCGGTCTACGGGGCGCGTCCGTTAAAACGTGCTATTCAACAGCAGATCGAAAA
CCCACTGGCGCAGCAAATCCTGTCTGGTGAACTGGTTCCTGGCAAAGTGATTCGCCTTGAAGCCAATGATGATCGTATTG
TGGCAGTGCAGTAA

Protein sequence :
MRLDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSIRPLLTSAGINAGQLRTAIDQALSRLPQVEGTGGD
VQPSSELVRVLNLCDKLAQKRGDNFISSELFVLAALESRGTLTDLLKSAGATTANITQAIEQMRGGESVNDQGAEDQRQA
LKKYTVDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLAL
DIGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYR
QYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASS
IRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDMLNEELDDKERQYSELEEEWKAEKASLSGTQTIKAELE
QAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQSEGKTMRLLRNKVTDAEIAEVLARWTGIPVSRMLEGEREKLL
RMEQELHSRVIGQNEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDDAMVRIDMSEFMEK
HSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNL
GSDLIQERFGELDYGRMKEMVLGVVSQNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLQRLYKRLEERGYEIHISDEAL
KLLSANGYDPVYGARPLKRAIQQQIENPLAQQILSGELVPGKVIRLEANDDRIVAVQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY0294 NP_454876.1 ClpB-like protein Not tested SPI-6 Protein 9e-102 43
aec27 YP_851418.1 ATPase Not tested PAI II APEC-O1 Protein 2e-99 41
aec27 AAQ96721.1 Aec27 Not tested AGI-1 Protein 1e-99 41