Gene Information

Name : STMDT12_C24980 (STMDT12_C24980)
Accession : YP_005248194.1
Strain : Salmonella enterica T000240
Genome accession: NC_016860
Putative virulence/resistance : Unknown
Product : putative oxidoreductase Fe-S binding subunit
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2585040 - 2587001 bp
Length : 1962 bp
Strand : -
Note : COG1142 Fe-S-cluster-containing hydrogenase components 2

DNA sequence :
ATGAATCGTTTTATTATGGCCAATAGCCAGCAGTGTCTGGGCTGCCATGCCTGCGAGGTCGCCTGCGTAATGGCTCACAA
TGATGAGCGACATGTCCTGACGTCACAGCGCTATCAGCCCCGAATTACTGTCATTAAACATCAGCACCAGCGCAGCGCGG
TTACATGTCACCATTGCGAAGATGCGCCCTGCGCCCGTAGCTGTCCGAACGGCGCGATCGCGCATATTAACGACAGCGTG
CAGGTCAATGCGCAGAAGTGCATCGGCTGTAAATCCTGCGTCGTCGCCTGTCCATTCGGCACCATGCAGATGGTATTGAC
GCCCGTCGCGCCAAACCAGTTCAAAGCCAGCGCGCATAAATGCGATCTGTGTCAGGGACGTGAACAGGGGCCGGCCTGTG
TGGAAAATTGCCCGGCGGATGCGCTGCAACTGGTCACCGAAGACTCGTTGACCCGTCTGGCTAAAACGCGACGGCTGCGT
ACCGCCCGGCAGGAGATTCGCCCCTGGCATACCGTGGATACACAACACAGTGGGGCAGCAAGCAGCAAAGCCGAGCGTAT
GCAGGCGACGCCGCCGCGCGGCGAACCGGATAAACTGGCGATTGAAGCGCGTAAAACCACCTTTGAGGAAATTTATCTGC
CGTTTCGCGCCGCGCAGGCGGAGCGTGAGGCGTCCCGCTGCCTCACATGCGGGGAACACAGTATCTGCGAATGGACCTGT
CCGCTGCATAACCATATTCCCCAGTGGATCGAACTGGTGAAAGCCGGCGATATTGATGCGGCGGTAGAGCTTTCCCACCA
GACCAACTGTCTGCCGGAAATTACCGGGCGCGTCTGTCCGCAGGATCGGCTATGCGAAGGCGCGTGTACACTCCGCGATG
AGTATGGCGCGGTTACCATCGGCAATATTGAGCGCTATATCTCCGATCGCGCTCTGAGCAAAGGCTGGCGTCCCGACCTG
TCGGACGTACAGAAGAGCGATAAGCGCGTGGCGATTATCGGCGCGGGGCCGGCAGGTCTTGCCTGCGCTGACGTGCTGGC
GCGCCATGGCGTAAGCGCCACCGTCTACGATCGCCATCCGGAAATCGGCGGTTTACTCACCTTTGGTATTCCGGCTTTCA
AACTGGATAAATCTCTGCTGGCGCGCCGTCGGGAAATCTTCAGCGCGATGGGGATTCGTTTCGAGCTTAACTGCGAAGTA
GGGAAAGATATTTCTCTGGAGACGCTGCTGGAGAGTTATGACGCCGTCTTTGTTGGGGTTGGAACCTATCGTTCCATGAA
GGCTGATTTACCGAATGAAGATGCGCCGGGGGTATATGATGCGTTGCCATTCCTCATCGCCAATACCAAACAGGTGATGG
GGCTTCCGGCGTTGCCTGACGAGCCGTTTATTGATACTGCGGGCCTTAACGTGGTTGTGCTGGGCGGCGGTGACACCGCA
ATGGACTGCGTACGTACGGCGCTGCGTCATGGCGCTGCTAACGTCACCTGCGCTTATCGCCGCGATGAGGCCAATATGCC
AGGGTCGAAAAAAGAGGTGAAAAACGCGCGGGAAGAGGGCGCGAACTTTGAATTTAACGTTCAGCCGGTTGAGTTGGTGC
TGGATACGCACGGGCGCGCCAGCGGTATTCGCTTTTTGCGTACGCGGCTTGGCGAACCGGATGGTCAGGGGCGACGCCGC
CCGGTACCTGTACCGGACAGCGAGTTCGTGATGCCGGCGGATGCGGTCATTATGGCGTTTGGTTTTCATCCGCATGGTAT
GTCGTGGCTGGAATCGCATGGCGTGAAGGTGGATAACTGGGGACGTATTGCCGCCAGCGTCGAGAGCGAGTTTCGTTACC
AGACGTCCAACCCGAAAATTTTCGCCGGCGGCGATGCGGTGCGCGGCGCCGATCTGGTGGTGACGGCGATGGCAGAAGGC
CGACATGCTGCGCAGGGGATACTCGACTGGTTAGCTAAATAA

Protein sequence :
MNRFIMANSQQCLGCHACEVACVMAHNDERHVLTSQRYQPRITVIKHQHQRSAVTCHHCEDAPCARSCPNGAIAHINDSV
QVNAQKCIGCKSCVVACPFGTMQMVLTPVAPNQFKASAHKCDLCQGREQGPACVENCPADALQLVTEDSLTRLAKTRRLR
TARQEIRPWHTVDTQHSGAASSKAERMQATPPRGEPDKLAIEARKTTFEEIYLPFRAAQAEREASRCLTCGEHSICEWTC
PLHNHIPQWIELVKAGDIDAAVELSHQTNCLPEITGRVCPQDRLCEGACTLRDEYGAVTIGNIERYISDRALSKGWRPDL
SDVQKSDKRVAIIGAGPAGLACADVLARHGVSATVYDRHPEIGGLLTFGIPAFKLDKSLLARRREIFSAMGIRFELNCEV
GKDISLETLLESYDAVFVGVGTYRSMKADLPNEDAPGVYDALPFLIANTKQVMGLPALPDEPFIDTAGLNVVVLGGGDTA
MDCVRTALRHGAANVTCAYRRDEANMPGSKKEVKNAREEGANFEFNVQPVELVLDTHGRASGIRFLRTRLGEPDGQGRRR
PVPVPDSEFVMPADAVIMAFGFHPHGMSWLESHGVKVDNWGRIAASVESEFRYQTSNPKIFAGGDAVRGADLVVTAMAEG
RHAAQGILDWLAK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
YP0342 CAF28571.1 putative oxidoreductase Not tested YAPI Protein 0.0 56