Gene Information

Name : STMDT12_C21590 (STMDT12_C21590)
Accession : YP_005247855.1
Strain : Salmonella enterica T000240
Genome accession: NC_016860
Putative virulence/resistance : Virulence
Product : putative cytoplasmic protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2227194 - 2228084 bp
Length : 891 bp
Strand : +
Note : -

DNA sequence :
TTGCCACTAAATCACCAAACGCCGCTCGTTTTTCAGTGGTTTGAACGCAATCCAGATAGATTTGGTCAAAACGAAATTCC
CATTATCAATACGCAGAAAAACCCTTATCTTAATAATATTATCAATGCTGCTATAATAGAAAAAGAAAGAATTATCGGTA
TTTTCGTTGATGGCGATTTTAGCAAGGGACAAAGAAAAGCATTGGGAAAATTGGAACAAAATTATAGAAACATAAAGGTT
ATTTACAATTCTGACCTTAATTATAGCATGTATGATAAAAAGTTAACGACGATTTATTTAGAAAACATCACCAAACTGGA
AGCTCAGTCAGCAAGTGAACGAGATGAGGTCTTGCTTAACGGGGTAAAAAAAAGCCTGGAAGATGTCTTGAAAAACAATC
CGGAGGAAACGCTTATTTCATCTCATAATAAAGACAAAGGTCACTTATGGTTTGACTTCTACAGAAATCTTTTCCTGCTA
AAAGGAAGCGATGCCTTTCTGGAAGCTGGTAAACCTGGTTGTCATCATCTGCAACCAGGCGGTGGGTGCATATATCTTGA
TGCAGATATGTTACTTACTGATAAACTCGGTACTTTGTATTTACCTGATGGTATCGCTATCCATGTAAGTCGTAAAGATA
ATCATGTTAGCCTTGAAAATGGGATTATTGCTGTTAACCGCAGCGAGCATCCAGCATTAATAAAAGGACTCGAAATTATG
CACAGTAAACCTTATGGCGATCCCTATAATGACTGGCTCAGTAAAGGGTTGAGGCATTATTTTGACGGTTCTCATATACA
AGATTATGACGCATTTTGCGATTTCATTGAATTTAAACACGAAAATATCATTATGAACACAAGCAGTTTAACTGCCAGTT
CTTGGAGGTAA

Protein sequence :
MPLNHQTPLVFQWFERNPDRFGQNEIPIINTQKNPYLNNIINAAIIEKERIIGIFVDGDFSKGQRKALGKLEQNYRNIKV
IYNSDLNYSMYDKKLTTIYLENITKLEAQSASERDEVLLNGVKKSLEDVLKNNPEETLISSHNKDKGHLWFDFYRNLFLL
KGSDAFLEAGKPGCHHLQPGGGCIYLDADMLLTDKLGTLYLPDGIAIHVSRKDNHVSLENGIIAVNRSEHPALIKGLEIM
HSKPYGDPYNDWLSKGLRHYFDGSHIQDYDAFCDFIEFKHENIIMNTSSLTASSWR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Z4328 NP_289553.1 hypothetical protein Not tested OI-122 Protein 2e-74 57
ECO26_5294 YP_003232174.1 T3SS effector NleB Virulence LEE Protein 8e-75 57
unnamed AAL57565.1 unknown Not tested LEE Protein 6e-75 57
st48 CAC81886.1 ST48 protein Not tested LEE II Protein 6e-75 57
unnamed CAI43815.1 hypothetical protein Not tested LEE Protein 6e-75 57
nleB1 YP_003223426.1 T3SS effector NleB Virulence LEE Protein 2e-74 56
ECO111_3725 YP_003236064.1 T3SS secreted effector NleB Virulence LEE Protein 1e-74 56