Gene Information

Name : STMDT12_C14280 (STMDT12_C14280)
Accession : YP_005247124.1
Strain : Salmonella enterica T000240
Genome accession: NC_016860
Putative virulence/resistance : Virulence
Product : type III secretion system apparatus protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1489940 - 1490932 bp
Length : 993 bp
Strand : +
Note : -

DNA sequence : 
ATGAATATTAAAATTAATGAGATAAAAATGACGCCCCCTACAGCATTTACCCCTGGCCAGGTTATAGAGGAACAAGAGGT
TATTTCGCCTTCAATGTTAGCTCTCCAGGAGTTACAGGAAACGACGGGGGCAGCGCTCTATGAGACGATGGAAGAAATAG
GAATGGCGCTGAGTGGTAAACTGCGCGAAAATTATAAATTCACTGATGCTGAGAAACTGGAGCGCAGACAGCAGGCTTTG
CTGCGTTTGATAAAACAAATACAGGAGGATAATGGGGCAACGTTGCGTCCGCTTACCGAAGAGAATAGTGATCCTGATTT
ACAGAATGCGTATCAAATTATCGCTCTTGCAATGGCGCTTACTGCCGGCGGGTTGTCAAAAAAGAAAAAACGCGATTTGC
AATCGCAACTGGATACGCTTACAGCGGAGGAGGGATGGGAACTTGCCGTTTTTAGTTTACTGGAACTTGGCGAAGTGGAT
ACCGCTACGCTGTCCTCTCTGAAGCGTTTTATGCAACAGGCGATAGACAACGATGAAATGCCCTTATCGCAGTGGTTCAG
ACGCGTGGCAGACTGGCCGGATCGCTGTGAACGGGTCCGTATTTTGCTAAGAGCAGTAGCCTTTGAACTTAGCATATGCA
TCGAACCCTCGGAGCAAAGTCGTTTGGCCGCAGCATTAGTACGTTTGCGTCGTTTGCTGTTATTCCTTGGCCTTGAAAAA
GAGTGCCAGCGTGAGGAGTGGATTTGCCAGTTGCCGCCTAATACATTACTGCCGCTACTACTCGATATTATTTGTGAGCG
CTGGCTTTTCAGTGATTGGTTGCTTGATAGACTTACCGCTATAGTTTCTTCATCGAAGATGTTCAATCGGTTACTCCAAC
AACTTGATGCGCAGTTTATGCTGATACCCGATAACTGTTTTAACGACGAAGATCAACGTGAACAAATTCTCGAAACGCTT
CGTGAAGTAAAGATAAATCAGGTTTTATTCTGA

Protein sequence : 
MNIKINEIKMTPPTAFTPGQVIEEQEVISPSMLALQELQETTGAALYETMEEIGMALSGKLRENYKFTDAEKLERRQQAL
LRLIKQIQEDNGATLRPLTEENSDPDLQNAYQIIALAMALTAGGLSKKKKRDLQSQLDTLTAEEGWELAVFSLLELGEVD
TATLSSLKRFMQQAIDNDEMPLSQWFRRVADWPDRCERVRILLRAVAFELSICIEPSEQSRLAAALVRLRRLLLFLGLEK
ECQREEWICQLPPNTLLPLLLDIICERWLFSDWLLDRLTAIVSSSKMFNRLLQQLDAQFMLIPDNCFNDEDQREQILETL
REVKINQVLF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ssaL NP_460377.1 type III secretion system apparatus protein Virulence SPI-2 Protein 1e-131 100
ssaL CAA70534.1 secretion system apparatus Virulence SPI-2 Protein 9e-132 100
ssaL YP_216420.1 secretion system apparatus protein SsaL Virulence SPI-2 Protein 1e-130 99
ssaL NP_456116.1 putative secretion system protein Virulence SPI-2 Protein 9e-128 98
ssaL NP_805083.1 secretion system protein Virulence SPI-2 Protein 9e-128 98

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
STMDT12_C14280 YP_005247124.1 type III secretion system apparatus protein VFG0512 Protein 5e-132 100