Gene Information

Name : STMDT12_C14130 (STMDT12_C14130)
Accession : YP_005247109.1
Strain : Salmonella enterica T000240
Genome accession: NC_016860
Putative virulence/resistance : Virulence
Product : secretion system chaperone
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1481288 - 1481614 bp
Length : 327 bp
Strand : +
Note : COG0078 Ornithine carbamoyltransferase

DNA sequence : 
ATGATGATAAAGAAAAAGGCTGCGTTTAGTGAATATCGTGATTTAGAGCAAAGTTACATGCAGCTAAATCACTGTCTTAA
AAAATTTCACCAAATCCGGGCTAAGGTGAGTCAACAGCTTGCTGAAAGGGCAGAGAGCCCCAAAAATAGCAGAGAGACAG
AGAGTATTCTTCATAACCTATTTCCACAAGGCGTTGCCGGGGTTAACCAGGAGGCCGAGAAGGATTTAAAGAAAATAGTA
AGTTTGTTTAAACAACTTGAAGTACGACTGAAACAACTTAATGCTCAAGCCCCGGTGGAGATACCGTCAGGAAAAACAAA
AAGGTAA

Protein sequence : 
MMIKKKAAFSEYRDLEQSYMQLNHCLKKFHQIRAKVSQQLAERAESPKNSRETESILHNLFPQGVAGVNQEAEKDLKKIV
SLFKQLEVRLKQLNAQAPVEIPSGKTKR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sseA AAC28878.1 SseA Virulence SPI-2 Protein 2e-46 100
sseA CAA12184.1 SseA Virulence SPI-2 Protein 2e-46 100
sseA NP_460362.1 secretion system chaperone protein Virulence SPI-2 Protein 3e-46 100
sseA YP_216405.1 secretion system effector protein SseA Virulence SPI-2 Protein 6e-46 99
sseA NP_456131.1 putative pathogenicity island protein Virulence SPI-2 Protein 6e-46 99
sseA NP_805068.1 pathogenicity island protein Virulence SPI-2 Protein 6e-46 99

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
STMDT12_C14130 YP_005247109.1 secretion system chaperone VFG0498 Protein 1e-46 100