Gene Information

Name : STMDT12_C14060 (STMDT12_C14060)
Accession : YP_005247102.1
Strain : Salmonella enterica T000240
Genome accession: NC_016860
Putative virulence/resistance : Virulence
Product : putative regulatory protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1472947 - 1473675 bp
Length : 729 bp
Strand : -
Note : COG0789 Predicted transcriptional regulators

DNA sequence : 
ATGTCGTATTCTATCGGCGAATTTGCCAGACTATGCGGTATCAATGCCGCCACGCTAAGGGCATGGCAGCGACGCTATGG
TTTATTGAAACCGCAGCGTACTGATGGCGGACATCGCTTATACAGCGATGACGATATTCGACAAGCGCTTAGCATTCTCG
ACTGGGTGAGAAAAGGCGTACCGATAAGCCAGGTCAAACCCTTACTGTCGCGTCCGGTTATTCGCCTGGGCGATAACTGG
ATAACGATCCAGGAGACGATGCTTCAACATCTCCACGAAGGGCGAATTGACGCGCTGCGGCAGTTGATTTATGACTGTGG
CCGGGAATATCCCCGCGCAGAACTGGTGACCCATTTATTGCGTCCGTTGCGCAGCAAAGTGTCCGCGCATCTTCCCGCCG
TGATGACGCTGCGCGAAATACTGGATGGCATCATTATTGCCTACACCTCTTTTTGCCTTGAAGGCGACAGAAAAGCGCCT
GGCAACAATGCCTTTATTAGCGGATGGAATCTCTCGGATCACTGTGAAATCTGGCTGGAAACGTTGACTCGTACCGGACA
AGAGCTGCGGCTCAATGTGCTTCCCTCGCCCCCAGTTGTGCTGGCGCCCGAGCTGTTCGCCCAGAGAAAATGGTTCCTGG
TGACCACCGGAAAGCTCACTGCCGGGCAGAAAAAACAGCTTGCCCAGTGGCGCAACGTGGTCGCTTCGCTGGAGGTTATC
ACACTATAG

Protein sequence : 
MSYSIGEFARLCGINAATLRAWQRRYGLLKPQRTDGGHRLYSDDDIRQALSILDWVRKGVPISQVKPLLSRPVIRLGDNW
ITIQETMLQHLHEGRIDALRQLIYDCGREYPRAELVTHLLRPLRSKVSAHLPAVMTLREILDGIIIAYTSFCLEGDRKAP
GNNAFISGWNLSDHCEIWLETLTRTGQELRLNVLPSPPVVLAPELFAQRKWFLVTTGKLTAGQKKQLAQWRNVVASLEVI
TL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
orf242 NP_460355.1 regulatory protein Not tested SPI-2 Protein 2e-111 100
ORF 242 CAB37409.1 - Not tested SPI-2 Protein 2e-111 100
t1258 NP_805061.1 transcriptional regulator Not tested SPI-2 Protein 6e-111 99
STY1730 NP_456138.1 putative transcriptional regulator Not tested SPI-2 Protein 6e-111 99
SC1411 YP_216398.1 MerR family transcriptional regulator Not tested SPI-2 Protein 7e-110 98

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
STMDT12_C14060 YP_005247102.1 putative regulatory protein VFG0491 Protein 9e-112 100