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Name : STMDT12_C01440 (STMDT12_C01440) Accession : YP_005245840.1 Strain : Salmonella enterica T000240 Genome accession: NC_016860 Putative virulence/resistance : Virulence Product : hypothetical protein Function : - COG functional category : - COG ID : - EC number : - Position : 166319 - 167704 bp Length : 1386 bp Strand : - Note : COG2804 Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB DNA sequence : ATGAAAGACGCTCAGCTCAACACCTTGTGTCAACGTCATCAGGCTGTACTGATCAATAGCGCCAGCAACAGTATCACTGT TGCGGTGGTCGACGCGCCCTCTCATGCGTTACTGGACGCTCTGCATTTCGCCACGCAAAAACAGATTGATATTGTGTGCT GGACTCGCCAGCAAATGGAAAATCATCGGCATAAGCCGGATCAGGCACCCTCGGCAAACGCCGCGAAAGGCGGAGAAACC GCAGCCCAGCTTCTCAATCAGACATTACGCTCGGCGATGGCGAAACGCGCCTCTGATATCCATCTCGAACCCGGCGCCAG CCGCTACCGAATAAGACTCCGCATCGACGGCGTTCTTCATATTCTGCAGGACATCGCCAAAGAGACGGGGCTTGCGCTGA CGGCCAGATTGAAAGTCCTGGGAAATTTGGACATCGCTGAACATCGACTGCCGCAGGACGGGCAATTTACCGTTGACCTG GCGGGCGACAGCATCTCTTTTCGTATCGCCACGCTTCCCTGTAAAGAAGGCGAAAAAGTCGTCTTACGGTTGTTGCATCA GGTTGAACAAACGCTGGATCTGGACACGCTGGGCATGTACGGGGCACAACTTACCGCTTTTAGACAAGCCCTACAGCAAC CTCAGGGGCTGGTACTGGTGACTGGCCCCACCGGTAGCGGAAAAACGGTCACGCTATACAGCGCGCTACAAACCCGGAAT ACGCCGGGTATCAACCTCTGTAGCGTTGAGGATCCGATAGAAATTCCACTGGATGGGATTAACCAGACGCAGATCCATCC CCGCGCCGGGCTCACCTTTCAAAATGTGCTGCGCGCGCTTTTACGCCAGGACCCTGACATCATCATGGTAGGTGAAATTC GTGACGGCGACACCGCAGAAATCGCCATTAAGGCGGCACAAACGGGCCATCTGGTACTTTCAACGCTCCATACGAACTCC ACCAGCGAAACCCTGATACGTTTGCAGCAAATGGGCGTAGCACGCTGGATGATCTCATCGGCGCTTACGCTGGTGGTAGC GCAACGCCTGGTAAGGAAGCTTTGCCCGCACTGCAAACAGCGTCTGAGCGATCCCGTGGTGCTATCGCCCAATCTTTGGC CCAGCGCGATACCGCGCTGGCAGGCAAGCGGCTGTCAGCATTGCTACCACGGCTTTTATGGCCGAACCGCGTTATTCGAA GTGTTAACCGTTACCCCGGCATTACGTCAGTTAATTGCGAGCGGCGCATCGGCGCAAGCACTGGAAGCCCACCTCCAACA GACCGGTACAGGGACGCTTTTTGAAAATGGCTGTCGCGCCGTTGAGCAAGGCATGACGTCCTTTGAAGAGATACTGCGCG TTCTGGGAATGCCCCATGAGCGTTAA Protein sequence : MKDAQLNTLCQRHQAVLINSASNSITVAVVDAPSHALLDALHFATQKQIDIVCWTRQQMENHRHKPDQAPSANAAKGGET AAQLLNQTLRSAMAKRASDIHLEPGASRYRIRLRIDGVLHILQDIAKETGLALTARLKVLGNLDIAEHRLPQDGQFTVDL AGDSISFRIATLPCKEGEKVVLRLLHQVEQTLDLDTLGMYGAQLTAFRQALQQPQGLVLVTGPTGSGKTVTLYSALQTRN TPGINLCSVEDPIEIPLDGINQTQIHPRAGLTFQNVLRALLRQDPDIIMVGEIRDGDTAEIAIKAAQTGHLVLSTLHTNS TSETLIRLQQMGVARWMISSALTLVVAQRLVRKLCPHCKQRLSDPVVLSPNLWPSAIPRWQASGCQHCYHGFYGRTALFE VLTVTPALRQLIASGASAQALEAHLQQTGTGTLFENGCRAVEQGMTSFEEILRVLGMPHER |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 3e-70 | 46 |
| gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 2e-70 | 46 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| STMDT12_C01440 | YP_005245840.1 | hypothetical protein | VFG2426 | Protein | 3e-70 | 46 |
| STMDT12_C01440 | YP_005245840.1 | hypothetical protein | VFG2048 | Protein | 1e-71 | 46 |
| STMDT12_C01440 | YP_005245840.1 | hypothetical protein | VFG0182 | Protein | 2e-73 | 44 |
| STMDT12_C01440 | YP_005245840.1 | hypothetical protein | VFG1876 | Protein | 5e-75 | 44 |
| STMDT12_C01440 | YP_005245840.1 | hypothetical protein | VFG0112 | Protein | 1e-77 | 44 |
| STMDT12_C01440 | YP_005245840.1 | hypothetical protein | VFG0233 | Protein | 7e-68 | 43 |
