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Name : STMDT12_C13980 (STMDT12_C13980) Accession : YP_005247094.1 Strain : Salmonella enterica T000240 Genome accession: NC_016860 Putative virulence/resistance : Virulence Product : putative regulatory protein Function : - COG functional category : - COG ID : - EC number : - Position : 1462493 - 1463719 bp Length : 1227 bp Strand : - Note : COG1349 Transcriptional regulators of sugar metabolism DNA sequence : ATGTTTAAAGAAGAAAGACGTCATGCCATCATTAATTTACTGATAAAGGATAATAGTGTTAGCGTCAGTAAACTTTCAGA CCTTTATAAGGTTAGCCAGGAGACTATTCGTTCCGATCTACGCTATTTCCAGAAATCAGGTATGCTTCAGCGTTGCTATG GCGGAGGGATTTTAAACCGTGACGCGCTGAGTAAGCTTATCACTGAAAATAAGATTGATATCTCCAGCACTATCGCCACG CCAATCCATCAGGATGCAAAACTGCGCCGGGAAAACCCAAAAAAAGCAGGCAAGGTGTGTGTTTTAGGCTCATTCAATAT TGATGTTTCAGCAACCGTGCCGTGGTTTCCACAAAGCGGAGAATCCATTCTGGCCAGTCAATTTGGATTCTATCCTGGAG GTAAAGGAGCCAACCAGGCTTTAGCGGCAAACAACGCTGGCGCTGCGGCACATTTTATTTTTAAAGTGGGCAAAGATCAG TTCAGCGCATTTGCTATGAATCATATTATTCAATCAGGCATCACCTCATACAGCGCGTATCAAACAGATAAAGCACCCAC CGGTAGCGCATTGATCTATGTCTCCGCCGTGGATGGCGATAATATTATCGCCATCTACCCTGGCGCCAATATGATGCTCA CCACGCAAGAGATTAATGAGCAACACCGTTATATCGCCGAGTCTGACGTTATGTTAATGCAGCTCGAAACGAACATTGAA GCGTTGACTGAATTTATTCGTCTGGGCAAACAAGAAAATAAAATGATCATGCTGAACCCTGCCCCCTATACGAAACAGGT GACGCATTTATTATCTGATATTGACATCATCACGCCGAATGAAACTGAAGCCTCTTTTTTATCCGGTGTAACCATTACTG ATATTAATGATGCAAAAAAAGCCGGAAATATTATTCTGCAATCCGGGGTGAAAAAAGTCATCATTACCCTTGGCGCCCGT GGCTCTCTGATCTGTGAGCACGCCCGCACGTTGTATATTCCTGCGTGGAGCGCCGTGGTAAAAGATGCCGCTGGGGCCGG TGACGCTTTTAATGGCGCCTTAGCCGCCGCGCTGGCGCGACAAGCAGACATGGTCGCAGCCATTCAATATGCCTCCGCTT TCGCTTCTCTGGCGGTGGAACAAGTCGGTGCGTCGAGTATGCCTCAGCACTTGCAGGTTTTACATCGAATGCGTACCCAA TCTAATAAAGTCATTCACATTAATTAA Protein sequence : MFKEERRHAIINLLIKDNSVSVSKLSDLYKVSQETIRSDLRYFQKSGMLQRCYGGGILNRDALSKLITENKIDISSTIAT PIHQDAKLRRENPKKAGKVCVLGSFNIDVSATVPWFPQSGESILASQFGFYPGGKGANQALAANNAGAAAHFIFKVGKDQ FSAFAMNHIIQSGITSYSAYQTDKAPTGSALIYVSAVDGDNIIAIYPGANMMLTTQEINEQHRYIAESDVMLMQLETNIE ALTEFIRLGKQENKMIMLNPAPYTKQVTHLLSDIDIITPNETEASFLSGVTITDINDAKKAGNIILQSGVKKVIITLGAR GSLICEHARTLYIPAWSAVVKDAAGAGDAFNGALAAALARQADMVAAIQYASAFASLAVEQVGASSMPQHLQVLHRMRTQ SNKVIHIN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ORF 408 | CAB37417.1 | - | Not tested | SPI-2 | Protein | 5e-165 | 100 |
| orf408 | NP_460347.1 | regulatory protein | Not tested | SPI-2 | Protein | 7e-165 | 100 |
| rbsk | YP_216390.1 | DeoR family transcriptional regulator | Not tested | SPI-2 | Protein | 9e-164 | 99 |
| APECO1_1076 | YP_853096.1 | carbohydrate kinase | Not tested | PAI IV APEC-O1 | Protein | 3e-56 | 47 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| STMDT12_C13980 | YP_005247094.1 | putative regulatory protein | VFG0483 | Protein | 3e-165 | 100 |
