Gene Information

Name : rlgA (STM474_p1067)
Accession : YP_005245637.1
Strain :
Genome accession: NC_016858
Putative virulence/resistance : Virulence
Product : RlgA
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 56447 - 57079 bp
Length : 633 bp
Strand : +
Note : -

DNA sequence :
TTGGGTTGTTTTTATCCCATTCCGGTGTTACGTTTTCATCATCTAGAGTTAAACGAGACAGTTTTCACCATTATGGCACT
TTACGGCTATGCCCGCGTTTCAACCAGCGATCAGGATCTTACTCTGCAGACACAAATTCTCCGCGCTGCTGGTTGTGAAA
TTATTCGTGCAGAAAAAGCCAGCGGAAGCGGCCGGACCGGAAGGAGCGAGTTGCAGCTGCTGCTGGAGTTCCTGCGCCCT
GGTGATACGTTGATGGTGACACGCGTGGATCGCCTGGCCCGCAGCATTAAGGACCTGCAGGACATTGTGTATGCCCTGAA
TCAACAGGGCGTAACGCTCAGGGCAACAGAACAGCCAGTGGACACGCGTTCAGCTGCAGGCAAAGCCTTCCTCGATATGC
TGGGTGTTTTCGCTGAGTTTGAAACCAATCTGAGACGTGAACGCCAGATGGAAGGCATTGCCGCGGCGAAAGCCAGGGGC
GTATACCGGGGAAGGAAACCGTCCATAGATCCTGCTGTGGTATATCGTCTGTATACCATTGAGAAGATGGGAGCCACAGC
CATCGCCCGCCAGCTCGGGATTGGGAGGGCGTCAGTCTACCGGGCGCTGGAAAATTATGAGCAGCCGGCGTAG

Protein sequence :
MGCFYPIPVLRFHHLELNETVFTIMALYGYARVSTSDQDLTLQTQILRAAGCEIIRAEKASGSGRTGRSELQLLLEFLRP
GDTLMVTRVDRLARSIKDLQDIVYALNQQGVTLRATEQPVDTRSAAGKAFLDMLGVFAEFETNLRRERQMEGIAAAKARG
VYRGRKPSIDPAVVYRLYTIEKMGATAIARQLGIGRASVYRALENYEQPA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
res AGF35025.1 resolvase Not tested SGI1 Protein 2e-24 44
res AGF35059.1 resolvase Not tested SGI1 Protein 2e-24 44
res AGK06929.1 resolvase Not tested SGI1 Protein 2e-24 44
res AGK06966.1 resolvase Not tested SGI1 Protein 2e-24 44
res AGK07012.1 resolvase Not tested SGI1 Protein 2e-24 44
res AGK07070.1 resolvase Not tested SGI1 Protein 2e-24 44
res AAK02044.1 resolvase Not tested SGI1 Protein 2e-24 44
tnpR ACD85600.1 TnpR resolvase Not tested SGI2 Protein 2e-24 44
res AGF34985.1 resolvase Not tested SGI1 Protein 2e-24 44
tnpR ACF06154.1 resolvase Not tested Tn5036-like Protein 1e-20 42
tnpR YP_006098373.1 transposon Tn21 resolvase Not tested Tn2411 Protein 2e-19 41
tnpR AAL08439.1 resolvase TnpR Not tested SRL Protein 1e-19 41
tnpR AFV53121.1 Tn21 resolvase Not tested AbGRI2-1 Protein 1e-19 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
rlgA YP_005245637.1 RlgA VFG1030 Protein 6e-20 41