Gene Information

Name : basR (STM474_4488)
Accession : YP_005245262.1
Strain : Salmonella enterica ST4/74
Genome accession: NC_016857
Putative virulence/resistance : Virulence
Product : DNA-binding transcriptional regulator BasR
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4555012 - 4555698 bp
Length : 687 bp
Strand : -
Note : -

DNA sequence : 
GTGCAGGAGACTAAGCGAATGAAGATACTGATTGTTGAAGACGACACGCTATTATTACAGGGGTTAATACTCGCCGCGCA
AACCGAAGGCTATGCGTGTGATGGCGTTTCGACAGCGCGTGCCGCCGAGCATAGTCTGGAGTCTGGTCATTACAGTCTGA
TGGTGCTGGATTTAGGGCTGCCCGATGAGGATGGCCTGCATTTCCTGACGCGAATCCGACAGAAAAAATATACCCTGCCG
GTACTCATTCTGACCGCCCGCGATACGCTCAATGACCGCATTACCGGGCTGGATGTCGGCGCAGATGATTATCTGGTTAA
ACCCTTCGCCCTGGAGGAGCTGCACGCCCGCATCCGCGCGCTGCTGCGCCGCCATAATAACCAGGGTGAAAGTGAACTGA
CGGTTGGCAATCTGACGCTCAATATAGGCCGCCATCAGGCATGGAGGGATGGACAGGAACTGACCCTGACGCCTAAGGAG
TACGCGTTGCTCTCACGGTTGATGCTCAAGGCAGGCAGTCCGGTGCACCGGGAAATTCTTTATAACGATATCTACAACTG
GGATAACGAACCCTCGACCAACACTCTGGAAGTGCATATACATAATTTGCGCGACAAAGTCGGCAAGTCGCGCATTCGCA
CGGTTCGCGGGTTTGGCTACATGCTGGTTGCCACTGAGGAAAGCTAA

Protein sequence : 
MQETKRMKILIVEDDTLLLQGLILAAQTEGYACDGVSTARAAEHSLESGHYSLMVLDLGLPDEDGLHFLTRIRQKKYTLP
VLILTARDTLNDRITGLDVGADDYLVKPFALEELHARIRALLRRHNNQGESELTVGNLTLNIGRHQAWRDGQELTLTPKE
YALLSRLMLKAGSPVHREILYNDIYNWDNEPSTNTLEVHIHNLRDKVGKSRIRTVRGFGYMLVATEES

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
armR AAN62112.1 putative response-regulator ArmR Not tested PAGI-2(C) Protein 1e-30 43
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 3e-23 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
basR YP_005245262.1 DNA-binding transcriptional regulator BasR BAC0487 Protein 1e-54 60

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
basR YP_005245262.1 DNA-binding transcriptional regulator BasR VFG0473 Protein 1e-91 100
basR YP_005245262.1 DNA-binding transcriptional regulator BasR VFG0596 Protein 1e-23 41