|
Name : STM474_4454 (STM474_4454) Accession : YP_005245228.1 Strain : Salmonella enterica ST4/74 Genome accession: NC_016857 Putative virulence/resistance : Virulence Product : putative ABC exporter outer membrane component Function : - COG functional category : - COG ID : - EC number : - Position : 4501157 - 4502476 bp Length : 1320 bp Strand : + Note : - DNA sequence : ATGAAGATTAAGATGTTTTTTCTGACGACTGCTTTTATTACACAAAGCACATACGCCAGCGAGCTTCCGGTCATTCCTCT AAGAGATTTAGTTAATGCCGCATTAACGCATCAGCCCTCTGTTGCTGTTTCATATTATGAGACTGAAAAGAAAAACAGTG ACTTAGATCTTTCACGGGCAGCACTTTATCCTACCCTGGATCTAACATCTGGCCTTAATAATAACAGGAAAGAGTCATCA GGTACCGAGAGGAACGTTGAAAATAAGGTGTCTTTATCATACCGAATAACGGATTTTGGAGTGAGGGGGGCTAATATCAG GAAATCTGAATATGAAAGAGATAATAGTAAAACTGACTATGAAAAAACAAAGAATATAGTGTCTCAGGAGGTTGTGACAA CCTATTACAACATCAGTAAATATCGTGAAATGATTGATGGCGTAAATCTGGAGAAAGAGTTTTATAAAAAGATGCTGGAA ACTTTTTCGTTGCTGGTATCTTCCGGTGTAGCTATGCAATCTGATATGCGTAAAGTACAAGTATCTATCGATGCATTAAA TACCAGAAGCATTATGTATCAGTCGATGTTGGATGATGAAATGTATAAAATGCAGAATATGACTGGTCTGAATTTATCGC CAGTTCAGATTCAAAGCGATGAAAAATTCAACCTCTTCAAAAAATATATCTTTGTCGAAAGCCCTGAAAAACTTATGGAC ATGGTGATGAAATACAACGATGACTATAAGATGCTTGTCAATACCCGAAAAGCCGCGACCGAAGATATTAATGCCGCAAA ATCATCCTATTTTCCGACTGTAGATCTTGTTTCCAGCTATGTACAGAATAACCCGAGCGGTAGTGCCAAAAAAAGTGATT ATGAAGATGAATTTAAAACGGGTATCAATGTCAGTTTCAACATTTTTAATGGGTTCAGAAATTCAGCCCAGGAAAGAAAA ATGGTGGCAAGTTACTCGCAGGCTAAGCTGCAAATTGACGATTTTTTGATTAAAACGCGTTATAACATTGATTCACAACT TTCAAGATACGCCGCTGCAAAAGAGACTTACTCAGTGGCGGAACGTTCACATACAAACGCGTTACAGCTTACTGAATTAT ATGAGCAGGAGTTTCAGTTAGGGCAAAAAAGTTTGCTTGATTTAATTTCAAGCCGTAATGAAGCATTTCAGGCATATGTA AGCATGATCGACAGCAAATATAGCCTGTATATTTTAAAGCTACAGCAACTCTCATTGATTTTTCATTTAATGGATTATTT AAAAGGAAATACTGAAAGTGAGTTAAATGTAATGAAATGA Protein sequence : MKIKMFFLTTAFITQSTYASELPVIPLRDLVNAALTHQPSVAVSYYETEKKNSDLDLSRAALYPTLDLTSGLNNNRKESS GTERNVENKVSLSYRITDFGVRGANIRKSEYERDNSKTDYEKTKNIVSQEVVTTYYNISKYREMIDGVNLEKEFYKKMLE TFSLLVSSGVAMQSDMRKVQVSIDALNTRSIMYQSMLDDEMYKMQNMTGLNLSPVQIQSDEKFNLFKKYIFVESPEKLMD MVMKYNDDYKMLVNTRKAATEDINAAKSSYFPTVDLVSSYVQNNPSGSAKKSDYEDEFKTGINVSFNIFNGFRNSAQERK MVASYSQAKLQIDDFLIKTRYNIDSQLSRYAAAKETYSVAERSHTNALQLTELYEQEFQLGQKSLLDLISSRNEAFQAYV SMIDSKYSLYILKLQQLSLIFHLMDYLKGNTESELNVMK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| siiC | CAE11795.1 | putative type-I secretion protein, putative outer membrane component | Virulence | SPI-4 | Protein | 0.0 | 100 |
| SC4138 | YP_219125.1 | ABC transporter outer membrane protein | Not tested | SPI-4 | Protein | 0.0 | 100 |
| STM4259 | NP_463124.1 | ABC exporter outer membrane component | Not tested | SPI-4 | Protein | 0.0 | 100 |
| STY4456 | NP_458556.1 | putative type-I secretion protein | Not tested | SPI-4 | Protein | 0.0 | 99 |
| spi4_C | AAC26641.1 | ABC exporter outer membrane component homolog | Virulence | SPI-4 | Protein | 0.0 | 99 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| STM474_4454 | YP_005245228.1 | putative ABC exporter outer membrane component | VFG0579 | Protein | 0.0 | 100 |
