Gene Information

Name : STM474_4343 (STM474_4343)
Accession : YP_005245122.1
Strain : Salmonella enterica ST4/74
Genome accession: NC_016857
Putative virulence/resistance : Virulence
Product : NleB protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4396664 - 4397692 bp
Length : 1029 bp
Strand : +
Note : -

DNA sequence :
ATGGAGCATTTAATTGTTATGATCCCACCATTAAATAGATATGTTCCCGCGCTTTCAAAAAATGAATTGGTTAAAACTGT
TACCAACAGGGACATTCAGTTTACAAGTTTTAATGGAAAAGATTATCCCTTGTGCTTTTTAGATGAGAAAACCCCTCTTC
TTTTCCAGTGGTTTGAGCGGAATCCTGCTCGCTTTGGGAAAAATGATATACCTATAATTAACACAGAGAAAAACCCCTAC
CTTAACAATATCATTAAAGCAGCAACAATTGAAAAAGAACGTCTTATAGGTATTTTTGTAGATGGTGATTTTTTTCCGGG
ACAAAAGGATGCTTTTTCAAAACTTGAGTATGACTATGAAAACATAAAAGTCATATATAGAAATGATATTGACTTTAGTA
TGTACGATAAAAAATTATCAGAAATTTATATGGAAAATATTTCTAAGCAAGAGTCCATGCCAGAAGAAAAAAGGGATTGT
CATTTACTGCAGCTATTGAAAAAAGAATTGAGTGATATTCAAGAGGGTAATGATTCATTAATTAAATCTTACTTACTGGA
TAAAGGCCATGGATGGTTTGATTTTTACAGGAATATGGCTATGTTAAAGGCTGGTCAGTTATTTTTGGAGGCGGATAAGG
TTGGGTGTTATGATTTATCAACAAATAGTGGGTGTATATATCTTGATGCTGATATGATTATCACGGAAAAACTGGGGGGT
ATATATATTCCGGATGGAATCGCTGTTCATGTAGAAAGGATAGATGGCCGTGCTTCTATGGAAAACGGGATAATAGCTGT
TGATCGCAATAACCACCCGGCTTTACTTGCTGGATTAGAAATAATGCATACTAAATTTGATGCTGATCCCTATTCTGATG
GTGTATGTAATGGAATTAGAAAACATTTTAATTATTCTTTAAATGAAGATTATAATTCTTTTTGCGATTTTATTGAGTTT
AAGCATGATAACATTATAATGAATACCAGTCAGTTTACGCAAAGTTCATGGGCGAGGCATGTGCAGTAG

Protein sequence :
MEHLIVMIPPLNRYVPALSKNELVKTVTNRDIQFTSFNGKDYPLCFLDEKTPLLFQWFERNPARFGKNDIPIINTEKNPY
LNNIIKAATIEKERLIGIFVDGDFFPGQKDAFSKLEYDYENIKVIYRNDIDFSMYDKKLSEIYMENISKQESMPEEKRDC
HLLQLLKKELSDIQEGNDSLIKSYLLDKGHGWFDFYRNMAMLKAGQLFLEADKVGCYDLSTNSGCIYLDADMIITEKLGG
IYIPDGIAVHVERIDGRASMENGIIAVDRNNHPALLAGLEIMHTKFDADPYSDGVCNGIRKHFNYSLNEDYNSFCDFIEF
KHDNIIMNTSQFTQSSWARHVQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
st48 CAC81886.1 ST48 protein Not tested LEE II Protein 3e-94 64
unnamed CAI43815.1 hypothetical protein Not tested LEE Protein 3e-94 64
Z4328 NP_289553.1 hypothetical protein Not tested OI-122 Protein 3e-93 64
ECO26_5294 YP_003232174.1 T3SS effector NleB Virulence LEE Protein 4e-94 64
unnamed AAL57565.1 unknown Not tested LEE Protein 3e-94 64
nleB1 YP_003223426.1 T3SS effector NleB Virulence LEE Protein 3e-94 62
ECO111_3725 YP_003236064.1 T3SS secreted effector NleB Virulence LEE Protein 4e-93 61