Gene Information

Name : safB (STM474_0314)
Accession : YP_005241246.1
Strain : Salmonella enterica ST4/74
Genome accession: NC_016857
Putative virulence/resistance : Virulence
Product : pili assembly chaperone
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 342223 - 343020 bp
Length : 798 bp
Strand : +
Note : -

DNA sequence : 
GTGCCTTGTTTAAGGCGCAATACACATCAAATCATCTATTTTTCTTTTACAATTTTTGATATGAAAATAGTTAATTTTGC
TGTAATGGCGGTAGCTTTGTTCGCCACTAATTCTATGGTTTCAGTATATGCCGTCAACCAGCAATTAAATTCAGCCACTA
AATTATTCAGCGTGAAGCTGGGGGCTACACGAGTGATTTATCACGCTGGTACGGCTGGAGCGACGCTCTCGGTGAGCAAC
CCGCAGAATTACCCTATTTTGGTTCAGTCTTCAGTCAAAGCAGCAGACAAAAGTTCGCCTGCTCCCTTTTTGGTGATGCC
GCCTCTATTTCGTTTAGAAGCAAACCAGCAGAGTCAACTGCGTATTGTCCGTACTGGTGGTGACATGCCAACGGATCGTG
AGACTTTACAGTGGGTCTGTATAAAGGCGGTACCACCCGAAAATGAACCGTCGGATACACAGGCTAAGGGCGCGACCCTT
GACCTCAATTTGTCCATCAACGCCTGTGATAAGCTGATTTTCCGCCCGGATGCCGTGAAGGGGACGCCGGAAGATGTTGC
AGGAAATTTAAGATGGGTGGAGACGGGCAACAAACTTAAGGTGGAGAACCCCACCCCGTTTTACATGAATTTAGCCTCTG
TCACAGTAGGGGGAAAGCCCATTACAGGGCTTGAGTATGTCCCCCCCTTTGCTGACAAAACACTAAATATGCCAGGTAGT
GCCCATGGTGATATCGAGTGGAGAGTTATTACAGACTTTGGTGGTGAAAGTCATCCGTTCCACTACGTTCTTAAATAA

Protein sequence : 
MPCLRRNTHQIIYFSFTIFDMKIVNFAVMAVALFATNSMVSVYAVNQQLNSATKLFSVKLGATRVIYHAGTAGATLSVSN
PQNYPILVQSSVKAADKSSPAPFLVMPPLFRLEANQQSQLRIVRTGGDMPTDRETLQWVCIKAVPPENEPSDTQAKGATL
DLNLSINACDKLIFRPDAVKGTPEDVAGNLRWVETGNKLKVENPTPFYMNLASVTVGGKPITGLEYVPPFADKTLNMPGS
AHGDIEWRVITDFGGESHPFHYVLK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
safB NP_454906.1 periplasmic fimbrial chaperone protein Not tested SPI-6 Protein 4e-105 91
afaB AAK16197.1 AfaB Virulence PAI-I AL862 Protein 4e-55 46
afaB ADD91742.1 putative AfaB-VIII periplasmic chaperone Not tested PAI-I AL862 Protein 4e-55 46

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
safB YP_005241246.1 pili assembly chaperone VFG0943 Protein 3e-52 49
safB YP_005241246.1 pili assembly chaperone VFG0850 Protein 9e-56 48
safB YP_005241246.1 pili assembly chaperone VFG0858 Protein 4e-52 48
safB YP_005241246.1 pili assembly chaperone VFG0852 Protein 4e-54 47