Gene Information

Name : STM474_2843 (STM474_2843)
Accession : YP_005243692.1
Strain : Salmonella enterica ST4/74
Genome accession: NC_016857
Putative virulence/resistance : Unknown
Product : major capsid-like protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2872346 - 2873428 bp
Length : 1083 bp
Strand : -
Note : -

DNA sequence : 
ATGAAAAAGAAAACCCGCTTTGCCTTTAACGCTTACCTGCAGCAGCTGGCGCGCCTGAATGGTGTGGAGGTTGAAGAACT
CTCCAGCAAGTTCACCGTTGAGCCGTCCGTGCAGCAGACGCTGGAAGACCACATCCAGCAGTCCGCTGCTTTCCTGACGC
TGATTAACATCACGCCGGTCACTGAGCAGTCAGGGCAGTTGCTGGGGCTGGGCGTTGGCAGCACCATTGCCGGAACCACC
GATACCACCACCAAAGAGCGCGAGCCTACCGATCCGACGCTGATGGAAGACGTGGAATACAAATGCGAACAGACCAACTT
TGATACGGTGCTGACCTACGCAAAACTGGATCTGTGGGCCAAGTTCCAGGACTTCCAGGTGCGTATCCGCAACGCCATCG
TCAAGCGTCAGGCGCTGGACCGCATCATGATCGGCTTTAACGGCGTGAAGCGCGCCAAAACCTCAAATCGTGCTGAAAAC
CAGCTGCTGCAGGACGTCAATAAAGGCTGGTTACAGAAAATCCGCGAAGACGCGCCGGATCATGTTATGGGCAGTAAAAC
CGCAGAAGACGGCACCACTACTGCGGAGCCGGTAAAAGTAGGTCCGGGTGGTAAGTATGTAAACCTTGACGCTGTGGTGA
TGGATGCCGTCAACGAGCTGATCGATGTGGAGTATCAGGATGATGATGAGCTGGTTGTTGTCTGTGGTCGTGAACTGCTG
TCTGACAAGTATTTCCCGCTGGTCAACAAAGAGCAGGACAACAGCGAAAAAATTGCCGCCGATATGATCATCAGCCAGAA
ACGTATGGGCGGCCTGCAGGCTGTGCGTGCGCCTTTCTTTCCGGCAAATGCATTGTTAATCACCCGACTGGATAACCTGT
CCATCTACTGGCAGGAAGACACCCGCCGCCGTTCTGTTATCGACAACCCGAAACGTGACCGGATTGAAAACTTTGAATCC
GTTAACGAGGCGTATGTGGTCGAGGACTACCGCTGCGCGGCACTGGTGGAAAACATCGAAATGAGTGATTTCACTCCGCC
TGCCGCACCTGTTGTAGCCGCAGAGTCAGGAAATGGAGAGTAA

Protein sequence : 
MKKKTRFAFNAYLQQLARLNGVEVEELSSKFTVEPSVQQTLEDHIQQSAAFLTLINITPVTEQSGQLLGLGVGSTIAGTT
DTTTKEREPTDPTLMEDVEYKCEQTNFDTVLTYAKLDLWAKFQDFQVRIRNAIVKRQALDRIMIGFNGVKRAKTSNRAEN
QLLQDVNKGWLQKIREDAPDHVMGSKTAEDGTTTAEPVKVGPGGKYVNLDAVVMDAVNELIDVEYQDDDELVVVCGRELL
SDKYFPLVNKEQDNSEKIAADMIISQKRMGGLQAVRAPFFPANALLITRLDNLSIYWQEDTRRRSVIDNPKRDRIENFES
VNEAYVVEDYRCAALVENIEMSDFTPPAAPVVAAESGNGE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY4625 NP_458707.1 putative major capsid protein Not tested SPI-7 Protein 6e-145 98
t4319 NP_807914.1 major capsid protein Not tested SPI-7 Protein 6e-145 98
unnamed ABR13466.1 predicted major capsid protein Not tested PAGI-6 Protein 2e-70 52