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Name : ldcC (STM474_0243) Accession : YP_005241183.1 Strain : Salmonella enterica ST4/74 Genome accession: NC_016857 Putative virulence/resistance : Virulence Product : lysine decarboxylase 2 Function : - COG functional category : - COG ID : - EC number : - Position : 276017 - 278158 bp Length : 2142 bp Strand : + Note : - DNA sequence : ATGAACATCATCGCCATTATGGGGCCGCACGGGGTTTATTATAAAGATGAACCCATCAAGGAGCTTGAGCGTGCATTACA ATCCCTGGGATTTCAAATTATCTGGCCGCAAAATAGCGTTGACTTGTTGAAGTTTATTGAACATAACCCGCGCATCTGCG GCGTTATTTTTGACTGGGATGAATACAGTCTCGACCTTTGTAGCGAAATCAACCAGCTAAATGAATACCTTCCTCTCTAC GCCTTTATCAATACCAACTCCACGCTGGACGTTAGCGTTCACGATATGCGCATGGCGCTGTGGTTTTTTGAGTATGCATT GGGGCTGGCTGAAGATATCGCGACGCGCATTCATCAATATACAAACGAATATCTCGATAATATTACGCCGCCGTTTACCA AAGCGCTTTTTACCTACGCCAAAGAAGGAAAATATACCTTTTGTACGCCGGGTCATATGGCGGGAACGGCGTATCAGAAA AGCCCGCCAGGCTGCCTGTTTTATGACTTTTTTGGCGGCAATACCTTAAAAGCTGATGTGTCGATTTCGGTGACTGAACT GGGATCGCTGCTGGATCACACCGGGCCGCATCTGGAAGCGGAAGAGTATATCGCCCGTACTTTTGGCGCCGAGCAGAGCT ATATGGTGACGAACGGTACGTCGACCTCGAATAAAATTGTCGGTATGTATGCCGCGCCTGCGGGAAGTACGCTACTTATT GATCGTAATTGTCATAAATCGCTGGCGCATTTGCTGATGATGAGCGATGTGGTGCCTCTCTGGTTGAAGCCGACGCGCAA TGCGCTCGGCATTCTCGGCGGTATTCCCCGAAGGGAATTTACCCGTGCAAGCATCGAAAGCAAGATAGAGGAGACCCCTC AGGCGCAATGGCCGGTGCATGCGGTTATCACCAATTCGACTTACGATGGTCTGCTGTATAACACTAACTGGATCAAGCAA ATGCTGGACGTTCCCTCGATCCATTTTGATTCCGCCTGGGTACCCTATACCCATTTCCATCCGATCTACCAGGGGAAAAG CGGGATGAGCGGCGATCGGGTGCCCGGAAAAGTGATTTTCGAAACGCAATCCACCCATAAAATGCTGGCGGCTTTTTCGC AGGCGTCGCTTATTCATATCAAAGGGGAATATGACGAAGAGACGTTTAACGAAGCGTTTATGATGCACACTTCCACATCG CCGAGCTATCCCATTGTCGCCTCTATCGAGACCGCAGCGGCGATGCTGCGCGGCAATCCAGGGAAAAGATTGATTAATCG TTCGGTGGAACGGGCGCTCCATTTTCGTAAAGAGGTACAGCGGCTACGTGAAGAGTCCGATAGCTGGTTCTTTGATATCT GGCAGCCGGAAGAGGTTGATGAGGCCGAATGCTGGCCGGTCACGCCGGGAGAAACCTGGCATGGCTTCACCGATGCCGAT GACGATCATATGTTCCTCGATCCGGTTAAGGTGACAATCCTGACGCCGGGGATGGATGAACAGGGCAACATGAGCGAAGA GGGGATACCCGCCGCGCTGGTGGCGAAGTTCCTTGATGAGCGAGGCGTGGTGGTGGAAAAAACCGGGCCGTATAATCTGC TGTTTTTGTTCAGCATAGGGATTGATAAGACCCGTGCGATGGGGCTGCTGCGCGGACTGACGGAATTTAAACGCGCCTAC GATCTTAACCTGCGCGTCAAAAATATGTTGCCGGATCTGTATGCGGAAGATCCGGATTTTTATCGCAATATGCGCATTCA GGATCTGGCGCAGGGGATCCATAAACTGATCCGCCAGCACGATCTTCCGGGGCTGATGCTGCGGGCGTTCGAGGTTTTAC CGGAGATGATCATGACCCCGCACCAGGCCTGGCAGCGTCAGATCAAAGGTGAGGTGGAAACCGTGGCGCTCGATCAACTG CCAGGGCGCGTTTCCGCGAATATGATCCTGCCTTATCCGCCAGGCGTTCCGCTGTTGATGCCCGGCGAGAGGATCACGCA ACAGAGTCGGGCCGTGCTCGATTTTCTGCTGATGCTCTGCTCGATTGGCCAGCATTATCCCGGTTTTGAAACGGATATTC ACGGCGCGAAACGGAATGAAGACGGGGTGTACCAGGTACGAGTCTTAAAACACGCCTGCTAG Protein sequence : MNIIAIMGPHGVYYKDEPIKELERALQSLGFQIIWPQNSVDLLKFIEHNPRICGVIFDWDEYSLDLCSEINQLNEYLPLY AFINTNSTLDVSVHDMRMALWFFEYALGLAEDIATRIHQYTNEYLDNITPPFTKALFTYAKEGKYTFCTPGHMAGTAYQK SPPGCLFYDFFGGNTLKADVSISVTELGSLLDHTGPHLEAEEYIARTFGAEQSYMVTNGTSTSNKIVGMYAAPAGSTLLI DRNCHKSLAHLLMMSDVVPLWLKPTRNALGILGGIPRREFTRASIESKIEETPQAQWPVHAVITNSTYDGLLYNTNWIKQ MLDVPSIHFDSAWVPYTHFHPIYQGKSGMSGDRVPGKVIFETQSTHKMLAAFSQASLIHIKGEYDEETFNEAFMMHTSTS PSYPIVASIETAAAMLRGNPGKRLINRSVERALHFRKEVQRLREESDSWFFDIWQPEEVDEAECWPVTPGETWHGFTDAD DDHMFLDPVKVTILTPGMDEQGNMSEEGIPAALVAKFLDERGVVVEKTGPYNLLFLFSIGIDKTRAMGLLRGLTEFKRAY DLNLRVKNMLPDLYAEDPDFYRNMRIQDLAQGIHKLIRQHDLPGLMLRAFEVLPEMIMTPHQAWQRQIKGEVETVALDQL PGRVSANMILPYPPGVPLLMPGERITQQSRAVLDFLLMLCSIGQHYPGFETDIHGAKRNEDGVYQVRVLKHAC |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cadA | NP_756988.1 | lysine decarboxylase, inducible | Not tested | PAI II CFT073 | Protein | 0.0 | 71 |
| unnamed | CAD66195.1 | putative cadaverin decarboxylase | Virulence | PAI III 536 | Protein | 0.0 | 62 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| ldcC | YP_005241183.1 | lysine decarboxylase 2 | VFG1670 | Protein | 0.0 | 62 |
