Gene Information

Name : bcfC (STM474_0024)
Accession : YP_005240969.1
Strain : Salmonella enterica ST4/74
Genome accession: NC_016857
Putative virulence/resistance : Virulence
Product : fimbrial usher
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 25803 - 28424 bp
Length : 2622 bp
Strand : +
Note : -

DNA sequence :
ATGCGTAATCAGCTTTTCATGACGCGATATTACTCCAGCGTAACTAAACCCGTATTAACCCCGCTGGCGTTGGCTATCGC
ACTGGCGCCTGCGCCGGGGTGGGCGGAAAACTATTTCAACCCGGCATTTCTGTCTGACGACCCGTCTGCGGTGGCCGACC
TATCGACCTTTTCCCGTAATGCCCAGGCGGCGGGGATGTATCGCGTTGACGTTTACCTGAACAATACGTTTCTCGCAACC
AGAGACATTGCCTTCCAGGCGGTGAAAACGACGGGAAAAAGCGCGCCCACCGATGACAGCGGATTACGCGCCTGCCTGAC
GCCTGAAATGCTTAAAAATATGGGGGTAAACACCGGGGCGTTTCCACTGTTGGCGAAGGCGGCGGCGGGAAGTTGCCCGG
ATCTCGCCAGTGCGATACCGGCCGCCCGGACCCGCTTTGATTTTGCGCAGCAACGTCTCGACATTAGCATCCCGCAGGCG
GCGATGGTTGCCAGCGCCAGAGGCTATATCCCACCGAAATACTGGGATGAAGGTATTAATGCGTTGCTATTGAATTACAC
CTTTACCGGCGCGAATAGTCAGGATCGGAGCCCAGGCGGCAGTGCGGAGAACAGCTATTTTCTTGGATTGAATAGCGGCC
TTAATCTGGGGGCCTGGCGGTTACGCGACTACTCCACATGGAACGCGAATAGCGGCGATCAGAATAGCGACAGCGACTGG
CAGCACATCAGTACTTATCTGGAACGTGATGTGGTCTTTTTGCAGGGAGAACTGACGGCAGGCGATAGTTATACCCCCTC
CGCATTATTCGACAGCCTTCCTTTTCGCGGGCTACAACTGGCGTCTGACGACAATATGTTGCCAGACAGCATGAAGGGCT
TCGCACCGACCATTCACGGCATTGCCAGAAGCAACGCGCAAGTGACCATTCGGCAAAACGGCTACATCATTAATCAGCGC
TATGTGCCGCCCGGGGCATTTACTATTAATGATCTCTATCCTACCGCCGCCAGCGGCGATTTGACTGTGGAAGTCAAAGA
GTCCGACGGTTCTATTAATCGTTATAACGTGCCCTATTCCGCCGTGCCGATTCTACAACGAGAAGGGCGGCTGAAGTATG
CGGCGACGGTGGCGGAGTATCGCAGCGATAGTAGTCAAAAAGAGAAGGTGAAATTCAGTCAGGCGACCTTGATATGGGGG
TTACCGCATGGTTTTACGCTGTATGGCGGAACACAACTTTCCAGTCATTATCACGCGCTGGCGATCGGCAGCGGCGCAAA
TCTGGGCGACTGGGGCGCGGTGTCGCTGGATGTCACCCAGGCTACCAGTACGCTGGCGGATAATAACACCTACCAGGGGC
AATCGCTGCGTTTCCTGTATGCCAAATCGCTTGCACAGTCAGGAACCAATTTACAGCTTATGGGCTATCGCTATTCAACC
TCGGGCTTTTACACGTTGGATGATACCACGTGGAAACGGATGAGCGGCTATGACGATGACAGTCGGACTGACAGCGATAA
AAGCAGGCCGGAATGGGCGGATTATTACAACCTTTATTACACCAGGAGGGGGAAAGTACAACTCGATATCAATCAACAGC
TAGGCGGGTTGGGATCGCTTTTTATTACCGGCAGCCAGCAAAGTTACTGGCACACTGATGAAAAGGATTCTTTGTTGCAG
GTGGGATACAGCGATACGCTGGCGGGTATTGCATGGAGCGTTTCTTACAACAATAACAAATCCGCAGGCGATGCGGAGCG
CGATCAAATTTTCGCGCTGAATATCTCGGTGCCGCTAAGTCAATGGCTGCAACACGGTGATGAGGTCACGCGCCATCACA
ATGTTTACGCTACCTTTAGCACCAGTACGGACAAACAGCATAACGTTACGCAGAATGCGGGCCTTAGCGGCACACTGCTG
GACGAAAACAATCTTAGTTACAACATACAGCAAGGTTATCAGAATCACGGTATTGGCGAAAGCGGCGCCGCTAGCCTGGA
ATACGATGGCGCGAAAGGCAACGCCAATATTGGCTATAACGTTAGCGATAACGGCGATTACCAGCAGGTGAATTATGGCC
TGAGTGGCGGCCTGGTGGCGCACGCGCATGGAGTGACGCTAAGCCAGCCGTTAGGCAATACCAATATTTTGATTGCCGCG
CCGGGCGCAGCCAATGTCGGCGTTGTCGACCAGCCGGGTATTCATACGGACGCGCGTGGCTATGCGGTGGTGCCGTATGC
GACAACATATCGCCAAAACCGTATGGCGCTGGACGTTAACGCCATGGCGGATGATGTCGATATTGATGACGCGGTGACTC
GCGTTGTGCCGACCGAAGGCGCGCTGGTTCTGGCCCGCTTTAAAGCGCGGGTCGGCGCGCGTGCCCTGGTAACGCTGAAT
CATAACGGTAAGCCTGTACCCTTTGGCGCAACGGTGACGGTGAATGATCGCCATGCGGAGGCGATTGTTGACGAGGCCGG
GGAGGTCTATCTTTCCGGGTTGTCAGCGCAAGGCGTTCTGCACGTTCGCTGGGGGAACCTACCGGATCAACAGTGCGTCG
CGTCCTATCATCTCTCTTCCTCCCGTCAGATTCTGAGTCGACAACATGCGGAGTGTCATTAA

Protein sequence :
MRNQLFMTRYYSSVTKPVLTPLALAIALAPAPGWAENYFNPAFLSDDPSAVADLSTFSRNAQAAGMYRVDVYLNNTFLAT
RDIAFQAVKTTGKSAPTDDSGLRACLTPEMLKNMGVNTGAFPLLAKAAAGSCPDLASAIPAARTRFDFAQQRLDISIPQA
AMVASARGYIPPKYWDEGINALLLNYTFTGANSQDRSPGGSAENSYFLGLNSGLNLGAWRLRDYSTWNANSGDQNSDSDW
QHISTYLERDVVFLQGELTAGDSYTPSALFDSLPFRGLQLASDDNMLPDSMKGFAPTIHGIARSNAQVTIRQNGYIINQR
YVPPGAFTINDLYPTAASGDLTVEVKESDGSINRYNVPYSAVPILQREGRLKYAATVAEYRSDSSQKEKVKFSQATLIWG
LPHGFTLYGGTQLSSHYHALAIGSGANLGDWGAVSLDVTQATSTLADNNTYQGQSLRFLYAKSLAQSGTNLQLMGYRYST
SGFYTLDDTTWKRMSGYDDDSRTDSDKSRPEWADYYNLYYTRRGKVQLDINQQLGGLGSLFITGSQQSYWHTDEKDSLLQ
VGYSDTLAGIAWSVSYNNNKSAGDAERDQIFALNISVPLSQWLQHGDEVTRHHNVYATFSTSTDKQHNVTQNAGLSGTLL
DENNLSYNIQQGYQNHGIGESGAASLEYDGAKGNANIGYNVSDNGDYQQVNYGLSGGLVAHAHGVTLSQPLGNTNILIAA
PGAANVGVVDQPGIHTDARGYAVVPYATTYRQNRMALDVNAMADDVDIDDAVTRVVPTEGALVLARFKARVGARALVTLN
HNGKPVPFGATVTVNDRHAEAIVDEAGEVYLSGLSAQGVLHVRWGNLPDQQCVASYHLSSSRQILSRQHAECH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fim2D AFH78429.1 putative fimbrial usher protein Virulence KpGI-5 Protein 0.0 51
sfaF CAC16953.2 SfaF protein Virulence PAI III 536 Protein 0.0 50

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
bcfC YP_005240969.1 fimbrial usher VFG0876 Protein 0.0 52
bcfC YP_005240969.1 fimbrial usher VFG1645 Protein 0.0 50
bcfC YP_005240969.1 fimbrial usher VFG0912 Protein 0.0 50
bcfC YP_005240969.1 fimbrial usher VFG0446 Protein 1e-178 49
bcfC YP_005240969.1 fimbrial usher VFG0454 Protein 3e-163 43