Gene Information

Name : sseF (STM474_1410)
Accession : YP_005242305.1
Strain : Salmonella enterica ST4/74
Genome accession: NC_016857
Putative virulence/resistance : Virulence
Product : secreted effector protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1444827 - 1445609 bp
Length : 783 bp
Strand : +
Note : overlaps CDS with the same product name

DNA sequence : 
ATGAAAATTCATATTCCGTCAGCGGCAAGTAATATAGTCGATGGTAATAGTCCTCCTTCCGATATACAAGCGAAGGAGGT
ATCGTTTCCTCCCCCTGAAATTCCAGCGCCTGGCACCCCCGCAGCCCCTGTGCTGCTTACGCCTGAACAAATAAGGCAGC
AGAGGGATTATGCGATACATTTTATGCAATACACTATTCGTGCGCTGGGTGCGACAGTCGTGTTTGGGTTATCGGTTGCT
GCAGCGGTAATTTCTGGCGGGGCAGGATTACCCATTGCTATTCTTGCGGGGGCGGCGCTCGTGATTGCTATTGGGGATGC
TTGCTGTGCGTATCATAATTATCAATCGATATGTCAGCAAAAGGAGCCATTACAAACCGCCAGTGATAGCGTTGCTCTTG
TGGTCAGTGCGCTGGCCTTAAAATGTGGGGCAAGTCTTAACTGCGCTAACACCCTTGCTAATTGTCTTTCTTTATTAATA
CGTTCAGGAATCGCTATTTCTATGTTGGTTTTACCCCTACAGTTTCCACTGCCCGCGGCTGAAAATATTGCGGCCTCTTT
GGACATGGGGAGTGTAATTACCTCCGTTAGCCTGACGGCGATAGGTGCGGTACTGGATTATTGCCTTGCCCGCCCCTCTG
GCGACGATCAGGAAAATTCTGTTGATGAACTTCATGCCGATCCCAGTGTGTTATTGGCGGAACAAATGGCAGCGCTCTGT
CAATCTGCTACTACACCTGCATTAATGGACAGTTCTGATCATACATCTCGGGGAGAACCATGA

Protein sequence : 
MKIHIPSAASNIVDGNSPPSDIQAKEVSFPPPEIPAPGTPAAPVLLTPEQIRQQRDYAIHFMQYTIRALGATVVFGLSVA
AAVISGGAGLPIAILAGAALVIAIGDACCAYHNYQSICQQKEPLQTASDSVALVVSALALKCGASLNCANTLANCLSLLI
RSGIAISMLVLPLQFPLPAAENIAASLDMGSVITSVSLTAIGAVLDYCLARPSGDDQENSVDELHADPSVLLAEQMAALC
QSATTPALMDSSDHTSRGEP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sseF NP_460369.1 secreted effector protein Virulence SPI-2 Protein 1e-91 100
sseF AAC28885.1 SseF Virulence SPI-2 Protein 9e-92 100
sseF CAA12191.1 SseF Virulence SPI-2 Protein 2e-90 99
sseF NP_805075.1 pathogenicity island effector protein Virulence SPI-2 Protein 3e-88 97
sseF NP_456124.1 putative pathogenicity island effector protein Virulence SPI-2 Protein 3e-88 97
sseF YP_216412.1 secretion system effector protein SseF Virulence SPI-2 Protein 1e-85 96

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
sseF YP_005242305.1 secreted effector protein VFG0505 Protein 5e-92 100