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Name : ssrA (STM474_1398) Accession : YP_005242293.1 Strain : Salmonella enterica ST4/74 Genome accession: NC_016857 Putative virulence/resistance : Virulence Product : sensor kinase Function : - COG functional category : - COG ID : - EC number : - Position : 1433688 - 1436498 bp Length : 2811 bp Strand : - Note : - DNA sequence : GTGATCAAGTGCCAAAGATTTTGCAACAGGCAACTGGAGGGAAGCATTATGAATTTGCTCAATCTCAAGAATACGCTGCA AACATCTTTAGTAATCAGGCTAACTTTTTTATTTTTATTAACAACAATAATTATTTGGCTGCTATCTGTGCTTACCGCAG CTTATATATCAATGGTTCAGAAACGGCAGCATATAATAGAGGATTTATCCGTTCTATCCGAGATGAATATTGTACTAAGC AATCAACGGTTTGAAGAAGCTGAACGTGACGCTAAAAATTTAATGTATCAATGCTCATTAGCGACTGAGATTCATCATAA CGATATTTTCCCTGAGGTGAGCCGGCATCTATCTGTCGGTCCTTCAAATTGCACGCCGACGCTAAACGGAGAGAAGCACC GTCTCTTTCTGCAGTCCTCTGATATCGATGAAAATAGCTTTCGTCGCGATAGTTTTATTCTTAATCATAAAAATGAGATT TCGTTATTATCTACTGATAACCCTTCAGATTATTCAACTCTACAGCCTTTAACGCGAAAAAGCTTTCCTTTATACCCAAC CCATGCCGGGTTTTACTGGAGTGAACCAGAATACATAAACGGCAAAGGATGGCACGCTTCCGTTGCGGTTGCCGATCAGC AAGGCGTATTTTTTGAGGTGACGGTTAAACTTCCCGATCTCATTACTAAGAGCCACCTGCCATTAGATGATAGTATTCGA GTATGGCTGGATCAAAACAACCACTTATTGCCGTTTTCATACATCCCGCAAAAAATACGTACACAGTTAGAAAATGTAAC GCTGCATGATGGATGGCAGCAAATTCCCGGATTTCTGATATTACGCACAACCTTGCATGGCCCCGGATGGAGTCTGGTTA CGCTGTACCCATACGGTAATCTACATAATCGCATCTTAAAAATTATCCTTCAACAAATCCCCTTTACATTAACAGCATTG GTGTTGATGACGTCGGCTTTTTGCTGGTTACTACATCGCTCACTGGCCAAACCGTTATGGCGTTTTGTCGATGTCATTAA TAAAACCGCAACTGCACCGCTGAGCACACGTTTACCAGCACAACGACTGGATGAATTAGATAGTATTGCCGGTGCTTTTA ACCAACTGCTTGATACTCTACAAGTCCAATACGACAATCTGGAAAACAAAGTCGCAGAGCGCACCCAGGCGCTAAATGAA GCAAAAAAACGCGCTGAGCGAGCTAACAAACGTAAAAGCATTCATCTTACGGTAATAAGTCATGAGTTACGTACTCCGAT GAATGGCGTACTCGGTGCAATTGAATTATTACAAACCACCCCTTTAAACATAGAGCAACAAGGATTAGCTGATACCGCCA GAAATTGTACACTGTCTTTGTTAGCTATTATTAATAATCTGCTGGATTTTTCACGCATCGAGTCTGGTCATTTCACATTA CATATGGAAGAAACAGCGTTACTGCCGTTACTGGACCAGGCAATGCAAACCATCCAGGGGCCAGCGCAAAGCAAAAAACT GTCATTACGTACTTTTGTCGGTCAACATGTCCCTCTCTATTTTCATACCGACAGTATCCGTTTACGGCAAATTTTGGTTA ATTTACTCGGGAACGCGGTAAAATTTACCGAAACCGGAGGGATACGTCTGACGGTCAAGCGTCATGAGGAACAATTAATA TTTCTGGTTAGCGATAGCGGTAAAGGGATTGAAATACAGCAGCAGTCTCAAATCTTTACTGCTTTTTATCAAGCAGACAC AAATTCGCAAGGTACAGGAATTGGACTGACTATTGCGTCAAGCCTGGCTAAAATGATGGGCGGTAATCTGACACTAAAAA GTGTCCCCGGGGTTGGAACCTGTGTCTCGCTAGTATTACCCTTACAAGAATACCAGCCGCCTCAACCAATTAAAGGGACG CTGTCAGCGCCGTTCTGCCTGCATCGGCAACTGGCTTGCTGGGGAATACGCGGTGAACCACCCCACCAGCAAAATGCGCT TCTCAACGCAGAGCTTTTGTATTTCTCCGGAAAACTCTACGACCTGGCGCAACAGTTAATATTGTGTACACCAAATATGC CAGTAATAAATAATTTGTTACCACCCTGGCAGTTGCAGATTCTTTTGGTTGATGATGCCGATATTAATCGGGATATCATC GGCAAAATGCTTGTCAGCCTGGGCCAACACGTCACTATTGCCGCCAGTAGTAACGAGGCTCTGACTTTATCACAACAGCA GCGATTCGATTTAGTACTGATTGACATTAGAATGCCAGAAATAGATGGTATTGAATGTGTACGATTATGGCATGATGAGC CGAATAATTTAGATCCTGACTGCATGTTTGTGGCACTATCCGCTAGCGTAGCGACAGAAGATATTCATCGTTGTAAAAAA AATGGGATTCATCATTACATTACAAAACCAGTGACATTGGCTACCTTAGCTCGCTACATCAGTATTGCCGCAGAATACCA ACTTTTACGAAATATAGAGCTACAGGAGCAGGATCCGAGTCGCTGCTCAGCGCTACTGGCGACAGATGATATGGTCATTA ATAGCAAGATTTTCCAATCACTGGACCTCTTGCTGGCTGATATTGAAAATGCCGTATCGGCTGGAGAAAAAATCGATCAG TTAATTCACACATTAAAAGGCTGTTTAGGTCAAATAGGGCAGACTGAATTGGTATGCTATGTCATAGACATTGAGAATCG CGTAAAAATGGGGAAAATCATCGCGCTGGAGGAACTAACCGACTTACGCCAGAAAATACGTATGATCTTCAAAAACTACA CCATTACTTAA Protein sequence : MIKCQRFCNRQLEGSIMNLLNLKNTLQTSLVIRLTFLFLLTTIIIWLLSVLTAAYISMVQKRQHIIEDLSVLSEMNIVLS NQRFEEAERDAKNLMYQCSLATEIHHNDIFPEVSRHLSVGPSNCTPTLNGEKHRLFLQSSDIDENSFRRDSFILNHKNEI SLLSTDNPSDYSTLQPLTRKSFPLYPTHAGFYWSEPEYINGKGWHASVAVADQQGVFFEVTVKLPDLITKSHLPLDDSIR VWLDQNNHLLPFSYIPQKIRTQLENVTLHDGWQQIPGFLILRTTLHGPGWSLVTLYPYGNLHNRILKIILQQIPFTLTAL VLMTSAFCWLLHRSLAKPLWRFVDVINKTATAPLSTRLPAQRLDELDSIAGAFNQLLDTLQVQYDNLENKVAERTQALNE AKKRAERANKRKSIHLTVISHELRTPMNGVLGAIELLQTTPLNIEQQGLADTARNCTLSLLAIINNLLDFSRIESGHFTL HMEETALLPLLDQAMQTIQGPAQSKKLSLRTFVGQHVPLYFHTDSIRLRQILVNLLGNAVKFTETGGIRLTVKRHEEQLI FLVSDSGKGIEIQQQSQIFTAFYQADTNSQGTGIGLTIASSLAKMMGGNLTLKSVPGVGTCVSLVLPLQEYQPPQPIKGT LSAPFCLHRQLACWGIRGEPPHQQNALLNAELLYFSGKLYDLAQQLILCTPNMPVINNLLPPWQLQILLVDDADINRDII GKMLVSLGQHVTIAASSNEALTLSQQQRFDLVLIDIRMPEIDGIECVRLWHDEPNNLDPDCMFVALSASVATEDIHRCKK NGIHHYITKPVTLATLARYISIAAEYQLLRNIELQEQDPSRCSALLATDDMVINSKIFQSLDLLLADIENAVSAGEKIDQ LIHTLKGCLGQIGQTELVCYVIDIENRVKMGKIIALEELTDLRQKIRMIFKNYTIT |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ssrA | NP_460357.1 | sensor kinase | Virulence | SPI-2 | Protein | 0.0 | 100 |
| spiR | AAC44299.1 | SpiR | Virulence | SPI-2 | Protein | 0.0 | 100 |
| ssrA | NP_456136.1 | putative two-component sensor kinase | Virulence | SPI-2 | Protein | 0.0 | 99 |
| ssrA | NP_805063.1 | two-component sensor kinase | Virulence | SPI-2 | Protein | 0.0 | 99 |
| ssrA | YP_216400.1 | secretion system regulator:sensor component | Virulence | SPI-2 | Protein | 0.0 | 99 |
| YPO0256 | YP_002345336.1 | two-component sensor/regulator | Not tested | Not named | Protein | 1e-163 | 45 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| ssrA | YP_005242293.1 | sensor kinase | VFG0493 | Protein | 0.0 | 100 |
