Gene Information

Name : ybdN (STM14_0704)
Accession : YP_005236312.1
Strain : Salmonella enterica 14028S
Genome accession: NC_016856
Putative virulence/resistance : Virulence
Product : putative 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 667336 - 668571 bp
Length : 1236 bp
Strand : -
Note : PAPS reductase/FAD synthetase

DNA sequence :
ATGTCGGTTTATAAAGTTCCGCTCGAGCAAAATGTTCTGGAAGCGGCTCAAGAGCGTATAATGTGGACCCTGGAAACCTT
ACCCCGGGTCTGCGTCTCATTTTCTGGTGGTAAAGATTCAGGACTTATGTTGCACCTGACGGCAACGTTGGCGCGCAAAA
TGAATAAAAAGATCCATGTTCTCTTCATTGACTGGGAAGCGCAATTCTCCTGTACCATCACCTATATTGAATCGTTACGT
GAATACTACGCGGACGTTATTGAGCGTTTTTATTGGGTCGCATTACCCTTAACCACACAAAATTCCCTTTCACAATACCA
GCCGGAGTGGCAGTGTTGGCAGCCGGGTACCGACTGGGTACGACAACCGCCAGAAGATGCGATTACCGATCCGGCCTTTT
TTTCCTTTTATCAACACGGCATGACCTTTGAACAGTTCGTTCGCGATTTTGCCGACTGGTTTTCAGAAAAACGTCCTGCC
GCTATGCTGGTCGGTATTCGTTCCGACGAATCCTATAACCGATTTGCCGCTATCGCTAACTCGCATAAGCTGCGCTTTGC
CGACGATAAGCCCTGGACCACGTTAGCCCCTAAGGGGCACACCTGGTATATCTATCCCATCTATGACTGGAAAACCGCAG
ATATCTGGACCTGGTTCGCCAAAACAGGTAAACCATGTAACCCTTTGTATAATTTGATGTATCAGGCTGGAGTACCGCCC
CGTTACATGCGTATTTGCGAACCGTTCGGCCCGGAACAACGACAGGGGTTATGGCTGTATCATGTTATCGAACCTGAGCG
CTGGGCGGCCATGTGCGCCAGAGTCAGCGGCGCACTCAGCGGAGGAATATACGCCGGACAAGACAGCCATTTTTACGGCC
ACCGGAAAATTTTAAAACCCGATCACCTTAACTGGGAAGAGTACGCGCTGCTCCTGCTACACAGTATGCCTGAAGTCACT
GCCGAACATTACCGTAATAAAATCGCCGTTTATTTGCAGTGGTATAAGAAAAAAGGCATGCACACCATTCCACAAACGCA
GCATGGCGATATCGGATCGCGCGATATTCCGTCGTGGCGACGGATCTGCAAAGTATTACTGAACAATGATTACTGGTGCC
GGGCGCTGTCATTCAGTCCGACAAAACCTAAGAATTACCAGCGTTATAACGAACGTATGAAAGCTAAACGCCAGGAATGG
GGGATCTTATGCAACACCGACTCACAACCGAAATAA

Protein sequence :
MSVYKVPLEQNVLEAAQERIMWTLETLPRVCVSFSGGKDSGLMLHLTATLARKMNKKIHVLFIDWEAQFSCTITYIESLR
EYYADVIERFYWVALPLTTQNSLSQYQPEWQCWQPGTDWVRQPPEDAITDPAFFSFYQHGMTFEQFVRDFADWFSEKRPA
AMLVGIRSDESYNRFAAIANSHKLRFADDKPWTTLAPKGHTWYIYPIYDWKTADIWTWFAKTGKPCNPLYNLMYQAGVPP
RYMRICEPFGPEQRQGLWLYHVIEPERWAAMCARVSGALSGGIYAGQDSHFYGHRKILKPDHLNWEEYALLLLHSMPEVT
AEHYRNKIAVYLQWYKKKGMHTIPQTQHGDIGSRDIPSWRRICKVLLNNDYWCRALSFSPTKPKNYQRYNERMKAKRQEW
GILCNTDSQPK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ibrA ADD91735.1 putative phosphoadenosine phosphosulfate reductase IbrA Not tested PAI-I AL862 Protein 3e-124 61
Z1643 AAQ19139.1 putative phosphoadenosine phosphosulfate reductase Not tested PAI I CL3 Protein 1e-124 61
Z1203 NP_286738.1 hypothetical protein Not tested TAI Protein 3e-124 60
Z1643 NP_287146.1 hypothetical protein Not tested TAI Protein 3e-124 60
ORF_31 AAZ04441.1 conserved hypothetical protein Not tested PAI I APEC-O1 Protein 2e-125 60
APECO1_3502 YP_854308.1 hypothetical protein Not tested PAI I APEC-O1 Protein 2e-125 60
c5209 NP_757057.1 hypothetical protein Not tested PAI II CFT073 Protein 2e-125 60
z1203 CAD33763.1 Z1203 protein Not tested PAI I 536 Protein 1e-123 60
STY4583 NP_458667.1 conserved hypothetical protein Not tested SPI-7 Protein 3e-125 58
t4277 NP_807875.1 hypothetical protein Not tested SPI-7 Protein 3e-125 58

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ybdN YP_005236312.1 putative 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase VFG1504 Protein 7e-124 60