Gene Information

Name : orgA (STM14_3469)
Accession : YP_005238979.1
Strain : Salmonella enterica 14028S
Genome accession: NC_016856
Putative virulence/resistance : Virulence
Product : needle complex assembly protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3034662 - 3035261 bp
Length : 600 bp
Strand : -
Note : oxygen-regulated invasion protein OrgA (SW:ORGA_SALTY); putative flagellar biosynthesis/type III secretion apparatus

DNA sequence :
ATGATAAGGCGAAATCGTCAAATGAATAGGCAGCCATTACCCATTATCTGGCAAAGAATCATTTTTGATCCGTTATCGTA
TATCCATCCTCAGCGGTTGCAGATAGCGCCGGAAATGATTGTCAGACCCGCCGCCAGGGCGGCGGCAAATGAGTTAATAC
TGGCGGCATGGCGGCTTAAGAACGGAGAAAAGGAGTGTATTCAAAACTCACTGACGCAGCTGTGGCTGCGTCAGTGGCGC
CGACTGCCGCAAGTAGCGTATTTACTCGGTTGCCATAAACTGAGAGCCGATCTGGCAAGGCAGGGAGCCTTGCTTGGCCT
GCCGGATTGGGCGCAAGCATTTTTGGCAATGCATCAGGGAACAAGTTTATCTGTCTGCAATAAGGCGCCGAATCACCGGT
TTTTACTTAGCGTCGGGTATGCACAGTTAAATGCCCTAAATGAATTTTTACCTGAATCTTTAGCACAGCGTTTTCCTTTG
CTTTTTCCTCCATTTATTGAGGAGGCATTGAAGCAGGATGCTGTAGAAATGTCAATTTTGCTACTGGCCTTACAATATGC
TCAAAAATATCCCAATACCGTCCCCGCTTTCGCCTGTTGA

Protein sequence :
MIRRNRQMNRQPLPIIWQRIIFDPLSYIHPQRLQIAPEMIVRPAARAAANELILAAWRLKNGEKECIQNSLTQLWLRQWR
RLPQVAYLLGCHKLRADLARQGALLGLPDWAQAFLAMHQGTSLSVCNKAPNHRFLLSVGYAQLNALNEFLPESLAQRFPL
LFPPFIEEALKQDAVEMSILLLALQYAQKYPNTVPAFAC

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
orgA YP_217789.1 inner membrane protein Not tested SPI-1 Protein 2e-73 100
orgA NP_461791.1 needle complex assembly protein Virulence SPI-1 Protein 5e-77 100
orgAa NP_457264.1 cell invasion protein Virulence SPI-1 Protein 2e-73 99
orgA NP_806473.1 oxygen-regulated invasion protein Virulence SPI-1 Protein 2e-73 99