Gene Information

Name : sitB (STM14_3459)
Accession : YP_005238969.1
Strain : Salmonella enterica 14028S
Genome accession: NC_016856
Putative virulence/resistance : Virulence
Product : putative ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3027520 - 3028341 bp
Length : 822 bp
Strand : +
Note : SitB (gi|5231095); Salmonella iron transporter; Fur-regulated

DNA sequence : 
ATGAGTCAATCTGCGATTACCGTTGATCAAGTCACGGTGACGTATCGCAACGGTCATACCGCCCTACGGGACGCCACTTT
TCAGGTGCCTGGCGGTTCAATCGCCGCGCTGGTAGGCGTAAATGGTTCCGGTAAGTCTACGTTATTTAAAGCGTTAATGG
GCTTTGTGCATCTTGCGCAGGGCGATATCACTATCCTGCAACAGTCAGTCAACAAGGCACTGAAAAAAAACCTCATTGCT
TATGTTCCGCAATCGGAAGAAGTGGACTGGTCATTTCCGGTGCTGGTAGAAGATGTGGTGATGATGGGACGCTACGGCCA
TATGGGCTGGCTACGCCGTCCCACTGCGCATGATCACGCCTGTGTTGACGCCGCGCTGGCGCGGGTGGATATGCAGGAGT
ATCGTCACAGGCAGATTGGCGAGCTGTCCGGCGGGCAGAAAAAACGTGTGTTTCTTGCCAGGGCCATCGCTCAGGATGGA
CAGGTGATCCTGCTGGATGAACCTTTTACCGGCGTGGATGTAAAAACCGAAGCGCGAATCATCGATCTACTGCGGGAACT
GCGCGATGAAGGCCGCACGATGCTGGTCTCAACGCATAATCTCGGCTCCGTCACCGAGTTTTGCGACTATACGGTAATGA
TTAAAGGAACCGTACTGGCCAGCGGCCCTACCGAAACCACGTTTACCGCCGCGAATCTGGAACAGGCGTTTAGCGGCGTT
CTACGTCATATCGCGTTAAGCGGAGGTGAAGAGCACATCATCACCGATGACGAGCGCCCCTTTATTTCCCGGCGCGTGGC
CAGCGGAGGAAAATCGTCATGA

Protein sequence : 
MSQSAITVDQVTVTYRNGHTALRDATFQVPGGSIAALVGVNGSGKSTLFKALMGFVHLAQGDITILQQSVNKALKKNLIA
YVPQSEEVDWSFPVLVEDVVMMGRYGHMGWLRRPTAHDHACVDAALARVDMQEYRHRQIGELSGGQKKRVFLARAIAQDG
QVILLDEPFTGVDVKTEARIIDLLRELRDEGRTMLVSTHNLGSVTEFCDYTVMIKGTVLASGPTETTFTAANLEQAFSGV
LRHIALSGGEEHIITDDERPFISRRVASGGKSS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitB NP_461783.1 ATP-binding protein Virulence SPI-1 Protein 6e-128 100
sitB AAD41066.1 SitB Virulence centisome 63 pathogenicity island Protein 4e-128 100
sitB YP_217782.1 iron transporter: fur regulated Virulence SPI-1 Protein 1e-127 99
sitB NP_457256.1 Iron transport protein, ATP-binding component Virulence SPI-1 Protein 3e-126 99
sitB NP_806465.1 iron ABC transporter ATP-binding protein Virulence SPI-1 Protein 3e-126 99

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
sitB YP_005238969.1 putative ATP-binding protein BAC0350 Protein 3e-128 100
sitB YP_005238969.1 putative ATP-binding protein BAC0440 Protein 7e-80 63
sitB YP_005238969.1 putative ATP-binding protein BAC0400 Protein 5e-49 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
sitB YP_005238969.1 putative ATP-binding protein VFG0526 Protein 2e-128 100