Gene Information

Name : ssaH (STM14_1703)
Accession : YP_005237277.1
Strain : Salmonella enterica 14028S
Genome accession: NC_016856
Putative virulence/resistance : Virulence
Product : type III secretion system apparatus protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1499769 - 1499996 bp
Length : 228 bp
Strand : +
Note : SsaH (gi|3776128)

DNA sequence :

ATGTTTGCGGGCGTTAACCATAGCCTGATTTCCCAGGTACATGCGATGTTACCAGCGCTAACGGTTATTGTTCCGGATAA
AAAATTACAGTTGGTATGTCTGGCATTATTGTTGGCGGGTTTAAATGAGCCGCTAAAAGCCGCGAAAATTTTATCGGATA
TAGATTTGCCAGAGGCTATGGCGCTGCGTCTGTTATTTCCTGCACCAAATGAGGGGTTTGAAAATTGA

Protein sequence :

MFAGVNHSLISQVHAMLPALTVIVPDKKLQLVCLALLLAGLNEPLKAAKILSDIDLPEAMALRLLFPAPNEGFEN

• Homologs from PAI DB

Gene	GenBank Accn	Product	Virulance or Resistance	PAI or REI	Alignment Type	E-val	Identity
ssaH	CAA12194.1	SsaH	Virulence	SPI-2	Protein	9e-17	100
ssaH	AAX49621.1	SsaH	Virulence	SPI-2	Protein	9e-17	100
ssaH	NP_460372.1	type III secretion system apparatus protein	Virulence	SPI-2	Protein	1e-16	100
ssaH	YP_216415.1	secretion system apparatus protein SsaH	Virulence	SPI-2	Protein	9e-17	100
ssaI	AAC28875.1	SsaI	Virulence	SPI-2	Protein	5e-16	99
ssaH	NP_456121.1	putative pathogenicity island protein	Virulence	SPI-2	Protein	2e-16	99
ssaH	NP_805078.1	pathogenicity island protein	Virulence	SPI-2	Protein	2e-16	99

• Homologs from VFDB (virulence genes)

Gene	GenBank Accn	Product	ID of source DB	Alignment Type	E-val	Identity
ssaH	YP_005237277.1	type III secretion system apparatus protein	VFG0508	Protein	4e-17	100