Gene Information

Name : samB (STM14_5577)
Accession : YP_005235583.1
Strain :
Genome accession: NC_016855
Putative virulence/resistance : Unknown
Product : SamB
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 46070 - 47344 bp
Length : 1275 bp
Strand : -
Note : mutagenesis by UV and mutagens; related to umuDC operon

DNA sequence :
ATGTTCGCTTTGGCTGACGTCAACTCGTTCTATGCCAGTTGCGAAAAGGTCTTTCGCCCCGATTTGCGTGACAGGTCTGT
GGTGGTCCTGAGTAACAACGATGGTTGTGTAATCGCGCGCAGCGCTGAAGCAAAAAAACTGGGCATAAAAATGGGGGTGC
CGTGGTTTCAACTGAGGTCGGCGAAATTTCCGGAGCCGGTTATCGCGTTCTCCAGTAATTACGCCCTCTACGCATCAATG
TCGAACAGGGTCATGGTTCACCTGGAAGAGCTGGCGCCACGCGTTGAGCAGTACTCCATTGACGAGATGTTTCTGGATAT
TCGCGGTATAGACAGTTGCATCGATTTCGAGGATTTCGGCCGACAGCTGCGTGAGCACGTTCGTTCCGGCACAGGGCTGA
CCATCGGCGTCGGAATGGGACCGACCAAAACGCTGGCTAAAAGCGCGCAATGGGCATCGAAAGAATGGTCACAGTTCGGA
GGCGTGCTTGCCCTGACGTTACACAATCAGAAACGAACGGAGAAACTGCTGTCACTGCAACCGGTGGAGGAAATCTGGGG
TGTGGGCCGCAGGATCTCAAAGAAGCTGAACACAATGGGGATCACCACAGCACTGCAGCTGGCCCGCGCGAATCCAACGT
TCATCAGGAAAAACTTTAATGTGGTTCTGGAGAGAACGGTCCGGGAACTCAATGGAGAAAGCTGTATTTCCCTGGAGGAA
GCACCGCCCCCCAAACAGCAGATAGTCTGCAGCAGAAGCTTTGGAGAACGAGTCACGACTTATGAAGCGATGCGGCAGGC
AGTCTGTCAGCACGCTGAACGTGCCGCCGAAAAGCTGCGTGGGGAACGGCAGTTCTGCAGGCATATTGCCGTGTTTGTGA
AAACATCGCCGTTCGCCGTAACTGAGCCCTACTACGGTAATCTGGCCAGTGAAAAACTGCTCATCCCCACGCAGGATACA
CGGGACATCATTGCCGCTGCCGTCAGAGCTCTGGACAGGATCTGGGTGGATGGTCACCGTTACGCAAAGGCAGGCTGTAT
GCTGAACGATTTCACGCCAACCGGGGTATCGCAGCTTAATTTGTTTGATGAAGTACAGCCGCGGGAACGGAGCGAGCAGC
TGATGCAAGTCCTGGATGGGATTAACCATCCGGGCAAGGGGAAAATATGGTTCGCCGGTCGGGGGATTGCCCCCGAGTGG
CAGATGAAAAGGGAACTACTTTCGCCAGCTTATACGACACGTTGGGCAGATATTCCTGCAGCGAAATTGACTTGA

Protein sequence :
MFALADVNSFYASCEKVFRPDLRDRSVVVLSNNDGCVIARSAEAKKLGIKMGVPWFQLRSAKFPEPVIAFSSNYALYASM
SNRVMVHLEELAPRVEQYSIDEMFLDIRGIDSCIDFEDFGRQLREHVRSGTGLTIGVGMGPTKTLAKSAQWASKEWSQFG
GVLALTLHNQKRTEKLLSLQPVEEIWGVGRRISKKLNTMGITTALQLARANPTFIRKNFNVVLERTVRELNGESCISLEE
APPPKQQIVCSRSFGERVTTYEAMRQAVCQHAERAAEKLRGERQFCRHIAVFVKTSPFAVTEPYYGNLASEKLLIPTQDT
RDIIAAAVRALDRIWVDGHRYAKAGCMLNDFTPTGVSQLNLFDEVQPRERSEQLMQVLDGINHPGKGKIWFAGRGIAPEW
QMKRELLSPAYTTRWADIPAAKLT

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
samB NP_458681.1 UV protection protein Not tested SPI-7 Protein 0.0 90
umuC NP_807889.1 DNA polymerase V subunit UmuC Not tested SPI-7 Protein 0.0 90
rulB CAI36137.1 nucleotidyltransferase/DNA polymerase Not tested PPHGI-1 Protein 5e-81 47
unnamed ABR13403.1 DNA-directed DNA polymerase Not tested PAGI-5 Protein 2e-64 45