Gene Information

Name : rlgA (STM14_5568)
Accession : YP_005235574.1
Strain :
Genome accession: NC_016855
Putative virulence/resistance : Virulence
Product : putative resolvase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 36753 - 37313 bp
Length : 561 bp
Strand : -
Note : -

DNA sequence :
ATGGCACTTTACGGCTATGCCCGCGTTTCAACCAGCGATCAGGATCTTACTCTGCAGACACAAATTCTCCGCGCTGCTGG
TTGTGAAATTATTCGTGCAGAAAAAGCCAGCGGAAGCGGCCGGACCGGAAGGAGCGAGTTGCAGCTGCTGCTGGAGTTCC
TGCGCCCTGGTGATACGTTGATGGTGACACGCGTGGATCGCCTGGCCCGCAGCATTAAGGACCTGCAGGACATTGTGTAT
GCCCTGAATCAACAGGGCGTAACGCTCAGGGCAACAGAACAGCCAGTGGACACGCGTTCAGCTGCAGGCAAAGCCTTCCT
CGATATGCTGGGTGTTTTCGCTGAGTTTGAAACCAATCTGAGACGTGAACGCCAGATGGAAGGCATTGCCGCGGCGAAAG
CCAGGGGCGTATACCGGGGAAGGAAACCGTCCATAGATCCTGCTGTGGTATATCGTCTGTATACCATTGAGAAGATGGGA
GCCACAGCCATCGCCCGCCAGCTCGGGATTGGGAGGGCGTCAGTCTACCGGGCGCTGGAAAATTATGAGCAGCCGGCGTA
G

Protein sequence :
MALYGYARVSTSDQDLTLQTQILRAAGCEIIRAEKASGSGRTGRSELQLLLEFLRPGDTLMVTRVDRLARSIKDLQDIVY
ALNQQGVTLRATEQPVDTRSAAGKAFLDMLGVFAEFETNLRRERQMEGIAAAKARGVYRGRKPSIDPAVVYRLYTIEKMG
ATAIARQLGIGRASVYRALENYEQPA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CDBH8_0918 YP_005160010.1 transposase-like protein Not tested Not named Protein 1e-20 46
res AGK06929.1 resolvase Not tested SGI1 Protein 1e-24 44
res AGK06966.1 resolvase Not tested SGI1 Protein 1e-24 44
res AGK07012.1 resolvase Not tested SGI1 Protein 1e-24 44
res AGK07070.1 resolvase Not tested SGI1 Protein 1e-24 44
res AAK02044.1 resolvase Not tested SGI1 Protein 1e-24 44
tnpR ACD85600.1 TnpR resolvase Not tested SGI2 Protein 1e-24 44
res AGF34985.1 resolvase Not tested SGI1 Protein 1e-24 44
res AGF35025.1 resolvase Not tested SGI1 Protein 1e-24 44
res AGF35059.1 resolvase Not tested SGI1 Protein 1e-24 44
res YP_005124341.1 DNA-invertase Not tested Not named Protein 1e-14 43
tnpR ACF06154.1 resolvase Not tested Tn5036-like Protein 2e-20 42
tnpR AAL08439.1 resolvase TnpR Not tested SRL Protein 1e-19 41
tnpR AFV53121.1 Tn21 resolvase Not tested AbGRI2-1 Protein 1e-19 41
tnpR YP_006098373.1 transposon Tn21 resolvase Not tested Tn2411 Protein 2e-19 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
rlgA YP_005235574.1 putative resolvase VFG1030 Protein 5e-20 41