Gene Information

Name : STMMW_42431 (STMMW_42431)
Accession : YP_005235243.1
Strain : Salmonella enterica D23580
Genome accession: NC_016854
Putative virulence/resistance : Virulence
Product : two-component response regulator
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4556418 - 4557086 bp
Length : 669 bp
Strand : -
Note : pfam_scan;Pfam:PF00486; E()=3.6E-21;score=74.0;query145- 216;description=Trans_reg_C; pfam_scan;Pfam:PF00072; E()=9.2E-30;score=102.6;query 3-113;description=Response_reg

DNA sequence : 
ATGAAGATACTGATTGTTGAAGACGACACGCTATTATTACAGGGGTTAATACTCGCCGCGCAAACCGAAGGCTATGCGTG
TGATGGCGTTTCGACAGCGCGTGCCGCCGAGCATAGTCTGGAGTCTGGTCATTACAGTCTGATGGTGCTGGATTTAGGGC
TGCCCGATGAGGATGGCCTGCATTTCCTGACGCGAATCCGACAGAAAAAATATACCCTGCCGGTACTCATTCTGACCGCC
CGCGATACGCTCAATGACCGCATTACCGGGCTGGATGTCGGCGCAGATGATTATCTGGTTAAACCCTTCGCCCTGGAGGA
GCTGCACGCCCGCATCCGCGCGCTGCTGCGCCGCCATAATAACCAGGGTGAAAGTGAACTGACGGTTGGCAATCTGACGC
TCAATATAGGCCGCCATCAGGCATGGAGGGATGGACAGGAACTGACCCTGACGCCTAAGGAGTACGCGTTGCTCTCACGG
TTGATGCTCAAGGCAGGCAGTCCGGTGCACCGGGAAATTCTTTATAACGATATCTACAACTGGGATAACGAACCCTCGAC
CAACACTCTGGAAGTGCATATACATAATTTGCGCGACAAAGTCGGCAAGTCGCGCATTCGCACGGTTCGCGGGTTTGGCT
ACATGCTGGTTGCCACTGAGGAAAGCTAA

Protein sequence : 
MKILIVEDDTLLLQGLILAAQTEGYACDGVSTARAAEHSLESGHYSLMVLDLGLPDEDGLHFLTRIRQKKYTLPVLILTA
RDTLNDRITGLDVGADDYLVKPFALEELHARIRALLRRHNNQGESELTVGNLTLNIGRHQAWRDGQELTLTPKEYALLSR
LMLKAGSPVHREILYNDIYNWDNEPSTNTLEVHIHNLRDKVGKSRIRTVRGFGYMLVATEES

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
armR AAN62112.1 putative response-regulator ArmR Not tested PAGI-2(C) Protein 1e-30 43
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 3e-23 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
STMMW_42431 YP_005235243.1 two-component response regulator BAC0487 Protein 1e-54 60

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
STMMW_42431 YP_005235243.1 two-component response regulator VFG0473 Protein 2e-91 100
STMMW_42431 YP_005235243.1 two-component response regulator VFG0596 Protein 1e-23 41