Gene Information

Name : STMMW_42061 (STMMW_42061)
Accession : YP_005235207.1
Strain : Salmonella enterica D23580
Genome accession: NC_016854
Putative virulence/resistance : Virulence
Product : single-strand DNA-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4498862 - 4499515 bp
Length : 654 bp
Strand : +
Note : pfam_scan;Pfam:PF00436; E()=1.6E-43;score=146.5;query 47-148;description=SSB

DNA sequence : 
ATGCAACAATATGAGGTTCGCGCGAGTGACCTGGAACCTGCATCGCAGCTATTAAAATGCTACGTGGAAATGGTACACTC
ACGCGTTTACACTATTTATGAAACGTATTCAGGAGACTCAATTATGGCCAGCAGAGGCGTAAACAAGGTGATTCTCGTTG
GTAATCTGGGCCAGGACCCGGAAGTACGCTATATGCCGAGTGGCGGCGCTGTCGCCAACTTAACGCTGGCTACTTCTGAA
TCCTGGCGCGATAAGCAGACCGGCGAAATGAAAGAGCAGACTGAATGGCACCGGGTGGTGATGTTCGGCAAACTGGCGGA
AGTGGCCGGCGAATATCTGCGTAAAGGTTCTCAGGTGTATATCGAAGGTCAATTGCGTACCCGCAAGTGGACCGATCAGA
GTGGCCAGGAACGCTATACGACTGAAATTAACGTTCCGCAGATCGGCGGCGTGATGCAGATGCTGGGTGGTCGCCAGGGC
GGCGGCGCACCGGCAGGCGGTCAGCAGCAGGGGGGTTGGGGTCAGCCGCAACAACCTCAGCAGCCGCAGGGCGGCAACCA
GTTCAGCGGCGGCGCGCAGTCGCGTCCACAGCAATCCGCGCCAGCGCCGTCTAACGAACCGCCAATGGATTTTGACGACG
ACATTCCGTTCTGA

Protein sequence : 
MQQYEVRASDLEPASQLLKCYVEMVHSRVYTIYETYSGDSIMASRGVNKVILVGNLGQDPEVRYMPSGGAVANLTLATSE
SWRDKQTGEMKEQTEWHRVVMFGKLAEVAGEYLRKGSQVYIEGQLRTRKWTDQSGQERYTTEINVPQIGGVMQMLGGRQG
GGAPAGGQQQGGWGQPQQPQQPQGGNQFSGGAQSRPQQSAPAPSNEPPMDFDDDIPF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ssb AAC26638.1 single-strand binding protein Not tested SPI-4 Protein 4e-41 79
ssB NP_458627.1 single strand binding protein Not tested SPI-7 Protein 8e-41 63
ssb NP_807839.1 single-stranded DNA-binding protein Not tested SPI-7 Protein 8e-41 63
ssb AAF14810.1 single strand binding protein Not tested SPI-7 Protein 5e-41 63

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
STMMW_42061 YP_005235207.1 single-strand DNA-binding protein VFG0576 Protein 4e-53 100