Gene Information

Name : STMMW_41011 (STMMW_41011)
Accession : YP_005235105.1
Strain : Salmonella enterica D23580
Genome accession: NC_016854
Putative virulence/resistance : Unknown
Product : transcription antitermination protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4385153 - 4385698 bp
Length : 546 bp
Strand : +
Note : pfam_scan;Pfam:PF00467; E()=3.3E-8;score=32.9;query 130-159;description=KOW; pfam_scan;Pfam:PF02357; E()=5.0E-26;score=90.5;query7-106;description=NusG

DNA sequence : 
ATGTCTGAAGCACCTAAAAAGCGCTGGTACGTCGTTCAGGCGTTTTCCGGTTTTGAAGGCCGCGTAGCCACATCGCTGCG
CGAGCATATCAAATTACACAATATGGAAGAGCTGTTTGGCGAAGTCATGGTGCCGACTGAAGAAGTCGTTGAGATCCGTG
GCGGCCAGCGTCGCAAAAGCGAACGCAAATTCTTCCCGGGTTACGTTCTGGTCCAGATGGTCATGAACGACGCAAGCTGG
CACCTGGTGCGCAGCGTGCCGCGTGTGATGGGCTTTATCGGCGGTACCTCTGACCGTCCGGCGCCGATCAGCGACAAAGA
AGTCGATGCGATCATGAACCGCCTGCAGCAGGTTGGCGATAAGCCGCGGCCGAAAACTCTGTTTGAACCGGGTGAAATGG
TTCGTGTTAACGACGGTCCGTTCGCAGACTTTAACGGCGTTGTCGAAGAAGTCGATTATGAGAAGTCTCGCCTGAAAGTG
TCTGTTTCTATCTTCGGTCGTGCGACCCCGGTAGAGCTGGACTTCAGTCAGGTTGAGAAAGCGTAA

Protein sequence : 
MSEAPKKRWYVVQAFSGFEGRVATSLREHIKLHNMEELFGEVMVPTEEVVEIRGGQRRKSERKFFPGYVLVQMVMNDASW
HLVRSVPRVMGFIGGTSDRPAPISDKEVDAIMNRLQQVGDKPRPKTLFEPGEMVRVNDGPFADFNGVVEEVDYEKSRLKV
SVSIFGRATPVELDFSQVEKA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00341 YP_008207806.1 Transcription antiterminator Not tested AbaR25 Protein 6e-57 59
BJAB0868_00345 YP_008211671.1 Transcription antiterminator Not tested AbaR26 Protein 6e-57 59