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Name : STMMW_32001 (STMMW_32001) Accession : YP_005234219.1 Strain : Salmonella enterica D23580 Genome accession: NC_016854 Putative virulence/resistance : Unknown Product : capsid portal protein Function : - COG functional category : - COG ID : - EC number : - Position : 3390193 - 3391239 bp Length : 1047 bp Strand : + Note : pfam_scan;Pfam:PF04860; E()=1.6E-50;score=171.4;query 53-333;description=Phage_portal DNA sequence : ATGGGTAAGCAAAAATCCCGTAAAACCTCCGCGCAGAAAGCCCGCGCACCACAGCAACTGAAAGCCAGCGCACCGCAAAA AATTGAGGCGTTCACCTTCGGTGAGCCGGTGCCGGTGCTCGATAAGCGCGACATTCTGGATTACGTCGAGTGCATCAGTA ACGGCAAATGGTACGAGCCGCCGGTCAGCTTCTCCGGGCTGGCAAAAAGCCTGCGCTCTGCAGTGCATCACAGCTCACCG ATTTACGTTAAACGCAACGTGCTCGCGAGCACCTACATTCCGCACCCACTGCTGTCCCGTCAGGATTTCAGCCGCTTTGC GCTCGACTATCTGGTATTCGGTAACGCCTTTCTTGAGCAGCGCCACAGCGTCACCGGCCAGTTAATCAAACTGCTGACTT CACCGGCAAAATATACCCGGCGCGGGGTCGATGACTCGGTTTTCTGGTTTGTGGAAAACTTCACTCAACCGCATGAGTTC GCACCCGATACCGTGTTCCACCTGCTGGAGCCTGATATTAATCAGGAGATTTACGGCCTGCCTGAATATCTCAGCGCGCT TAATTCCGCATGGCTGAATGAATCCGCGACGCTGTTCCGCCGCAAGTATTACCAGAACGGCGCGCACGCAGGTTACATCA TGTATGTGACTGACCCGGCGCAAAGCGCGACTGACGTCGAATCGCTGCGCGATGCAATGCGTAACTCTAAAGGGCTCGGC AACTTTAAAAACCTGTTTTTCTACTCACCGAACGGGAAACCGGACGGCATAAAAATCGTGCCATTGAGCGAAGTCGCCAC AAAGGATGACTTTTTCAACATCAAGAAAGCCAGCGCCGCTGACCTGATGGATGCGCACCGCGTACCGTTCCAGCTAATGG GTGGCAAGCCCGAGAATATCGGCTCACTCGGTGACGTTGAGAAGGTGGCAAAGGTATTTGTGCGTAACGAGCTGTCGCCG CTGCAGGACAGGTTCAGGGAGGTAAACGACTGGCTCGGCATGGAGGTCATCAGGTTCAAAGAGTACACCCTCGACAACCC GGAATAA Protein sequence : MGKQKSRKTSAQKARAPQQLKASAPQKIEAFTFGEPVPVLDKRDILDYVECISNGKWYEPPVSFSGLAKSLRSAVHHSSP IYVKRNVLASTYIPHPLLSRQDFSRFALDYLVFGNAFLEQRHSVTGQLIKLLTSPAKYTRRGVDDSVFWFVENFTQPHEF APDTVFHLLEPDINQEIYGLPEYLSALNSAWLNESATLFRRKYYQNGAHAGYIMYVTDPAQSATDVESLRDAMRNSKGLG NFKNLFFYSPNGKPDGIKIVPLSEVATKDDFFNIKKASAADLMDAHRVPFQLMGGKPENIGSLGDVEKVAKVFVRNELSP LQDRFREVNDWLGMEVIRFKEYTLDNPE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| STY4628 | NP_458710.1 | probable capsid portal protein | Not tested | SPI-7 | Protein | 1e-107 | 61 |
| t4321 | NP_807917.1 | capsid portal protein | Not tested | SPI-7 | Protein | 1e-107 | 61 |
| unnamed | ABR13463.1 | predicted capsid packaging protein | Not tested | PAGI-6 | Protein | 1e-78 | 50 |
