Gene Information

Name : STMMW_31981 (STMMW_31981)
Accession : YP_005234217.1
Strain : Salmonella enterica D23580
Genome accession: NC_016854
Putative virulence/resistance : Unknown
Product : putative capsid scaffolding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3387404 - 3388258 bp
Length : 855 bp
Strand : -
Note : none; pfam_scan;Pfam:PF05929; E()=1.3E-127;score=424.4;query 6-284;description=Phage_GPO

DNA sequence :
ATGGCAAAAAAAGTATCAAAATTCTTTCGCATCGGCGTCGAGGGTGATACCTGCGACGGGCGCATTATCAGCGCCAGCGA
TATTCAGGAAATGGCCGAAACCTATGACCCGCGCGTCTACGGTTGCCGTATCAACCTTGAACACATTCGCGGCCTTTTGC
CCGACGGCATGTTTAAACGTTATGGCGATGTGGTTGAGCTGAAAGCCGAAAAGATAGACGACGATTCTGCGCTGAATGGC
AAATGGGCGTTGTTCGCCAGAATCACCCCGACCGATGACCTTATCGCGATGAATAAAGCCGCGCAGAAGGTCTATACCTC
TATGGAAATTCAGCCGAATTTTGGTAACAGCGGCAAATGCTATCTTGTCGGCCTTGCGGTCACTGATGACCCTGCGAGCC
TCGGTACTGAATACCTCGAATTCTGCCGCAAGGCGAAGCACAACCCGCTGCAGCGCTTTAAGGCCAGCCCTGAAAATGTC
TTTTCCGCCGCCACGCTGGCCGAGCTGGAATTTGAAGATGTTCCCGACACGGTGCTTAACAGCCTGGCCGACAAGGTGAA
AGCCATTTTCAGCCGTAAGCAGGTCAGCGACGATGCGCGCATGAGTGATGTACATGAGGCGGTGACCGCCGTCAGCGAAC
ATGTGCAGACCAGCCTCACTGCGCAGGATAAGCGTCTTTCCGATATGGAAACCGCGCTTGCCACCTTTAAACAGGAACTG
ACCGGCAAGGTTGAAGAAACCAGCCAGGCATTTTCCGCCCTGAAAACCACCCTCGACAAAACCGAAAGTTTCAGCCAGCC
GCGACGCACGAAAGCCAGCGGCGGCGGTGGCGATGAGCTGCTGACCGACTGCTGA

Protein sequence :
MAKKVSKFFRIGVEGDTCDGRIISASDIQEMAETYDPRVYGCRINLEHIRGLLPDGMFKRYGDVVELKAEKIDDDSALNG
KWALFARITPTDDLIAMNKAAQKVYTSMEIQPNFGNSGKCYLVGLAVTDDPASLGTEYLEFCRKAKHNPLQRFKASPENV
FSAATLAELEFEDVPDTVLNSLADKVKAIFSRKQVSDDARMSDVHEAVTAVSEHVQTSLTAQDKRLSDMETALATFKQEL
TGKVEETSQAFSALKTTLDKTESFSQPRRTKASGGGGDELLTDC

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ABR13465.1 putative capsid scaffold Not tested PAGI-6 Protein 3e-44 45
STY4626 NP_458708.1 putative capsid protein Not tested SPI-7 Protein 4e-49 45
t4320 NP_807915.1 capsid protein Not tested SPI-7 Protein 4e-49 45